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Manel, S.; Gugerli, F.; Thuiller, W.; Alvarez, N.; Legendre, P.; Holderegger, R.; Gielly, L.; Taberlet, P.; IntraBioDiv Consortium, 2012:
Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation. Mol. Ecol. 21: 3729-3738.

Winkler, M.; Tribsch, A.; Schneeweiss, G.M.; Bordbeck, S.; Gugerli, F.; Holderegger, R.; Abbotts, R.J.; Schönswetter, P., 2012:
Tales of the unexpected: Phylogeography of the arctic-alpine model plant Saxifraga oppositifolia (Saxifragaceae) revisited. Mol. Ecol. 21: 4618-4630.

Aavik, T.; Edwards, P.J.; Holderegger, R.; Graf, R.; Billeter, R., 2012:
Genetic consequences of using seed mixtures in restoration: A case study of a wetland plant Lychnis flos-cuculi. Biol. Conserv. 145, 1: 195-204.

Widmer, I.; Dal Grande, F.; Excoffier, L.; Holderegger, R.; Keller, C.; Mikryukov, V.S.; Scheidegger, C., 2012:
European phylogeography of the epiphytic lichen fungus Lobaria pulmonaria and its green algal symbiont. Mol. Ecol. 21: 5827-5844.

Taberlet, P.; Zimmermann, N.E.; Englisch, T.; Tribsch, A.; Holderegger, R.; Alvarez, N.; Niklfeld, H.; Coldea, G.; Mirek, Z.; Moilanen, A.; Ahlmer, W.; Marsan, P.A.; Bona, E.; Bovio, M.; Choler, P.; Cieslak, E.; Colli, L.; Cristea, V.; Dalmas, J.-P.; Frajman, B.; Garraud, L.; Gaudeul, M.; Gielly, L.; Gutermann, W.; Jogan, N.; Kagalo, A.A.; Korbecka, G.; Küpfer, P.; Lequette, B.; Letz, D.R.; Manel, S.; Mansion, G.; Marhold, K.; Martini, F.; Negrini, R.; Niño, F.; Paun, O.; Pellecchia, M.; Perico, G.; Piekos-Mirkowa, H.; Prosser, F.; Puscas, M.; Ronikier, M.; Scheuerer, M.; Schneeweiss, G.M.; Schönswetter, P.; Schratt-Ehrendorfer, L.; Schüpfer, F.; Selvaggi, A.; Steinmann, K.; Thiel-Egenter, C.; van Loo, M.; Winkler, M.; Wohlgemuth, T.; Wraber, T.; Gugerli, F.; IntraBioDiv Consortium, 2012:
Genetic diversity in widespread species is not congruent with species richness in alpine plant communities. Ecol. Lett. 15: 1439-1448.

Parisod, C.; Holderegger, R., 2012:
Meeting review: Adaptive landscape genetics: pitfalls and benefits. Mol. Ecol. 21: 3644-3646.

Arrigo, N.; Holderegger, R.; Alvarez, N., 2012:
Automated scoring of AFLPs using RawGeno v 2.0, a free R CRAN library. [Chapter 10] In: Pompanon, F.; Bonin, A. (eds) Data production and analysis in population genomics. Methods in Molecular Biology, vol. 888. New York, Humana Press. 155-175.

Kamm, U.; Gugerli, F.; Rotach, P., Edwards, P.; Holderegger, R., 2012:
Seltenes und zerstreutes Vorkommen: Auswirkungen auf den Paarungserfolg des Speierlings. Schweiz. Z. Forstwes. 163, 4: 130-136.

Diacon-Bolli, J.; Dalang, T.; Holderegger, R.; Bürgi, M., 2012:
Heterogeneity fosters biodiversity: linking history and ecology of dry calcareous grasslands. Basic Appl. Ecol. 13: 641-653.

Keller, D.; Jung, E.; Holderegger, R., 2012:
Development of microsatellite markers for the wetland grasshopper Stethophyma grossum. Conserv. Genet. Resour. 4: 507-509.