Navigation mit Access Keys

List de publications

Menu principal

 

Biodiversité et écologie de la conservation > Génétique écologique

Olsson, S.; Dauphin, B.; Jorge, V.; Grivet, D.; Farsakoglou, A.M.; Climent, J.; Alizoti, P.; Faivre-Rampant, P.; Pinosio, S.; Milesi, P.; Scalabrin, S.; Bagnoli, F.; Scotti, I.; Vendramin, G.G.; Gonzalez-Martinez, S.C.; Fady, B.; Aravanopoulus, F.; Bastien, C.; Alia, R., 2023: Diversity and enrichment of breeding material for resilience in European forests. Forest Ecology and Management, 530: 120748 (11 pp.). doi: 10.1016/j.foreco.2022.120748

Zweifel, R.; Basler, D.; Braun, S.; Buchmann, N.; Conedera, M.; Etzold, S.; Eugster, W.; Floriancic, M.; Fonti, P.; Gessler, A.; Haeni, M.; Hoch, G.; Hummel, D.; Kahmen, A.; Koechli, R.; Maeder, M.; Nievergelt, D.; Peter, M.; Peters, R.; ... Wilhelm, M., 2022: TreeNet. Technischer Bericht 2022. 76 p.

Gugerli, F.; Brodbeck, S.; Bebi, P.; Bollmann, K.; Dauphin, B.; Gossner, M.; Krumm, F.; Peter, M.; Queloz, V.; Reiss, G.; Rellstab, C.; Stofer, S.; Von Arx, G.; Wasem, U.; Zweifel, R., 2022: Swiss stone pine - portrait of a mountain forest tree. WSL: fact sheet, 72. 16 p. doi: 10.55419/wsl:32467

Steidinger, B.S.; Büntgen, U.; Stobbe, U.; Tegel, W.; Sproll, L.; Haeni, M.; Moser, B.; Bagi, I.; Bonet, J.; Buée, M.; Dauphin, B.; Martínez‐Peña, F.; Molinier, V.; Zweifel, R.; Egli, S.; Peter, M., 2022: The fall of the summer truffle: recurring hot, dry summers result in declining fruitbody production of Tuber aestivum in Central Europe. Global Change Biology, 28, 24: 7376-7390. doi: 10.1111/gcb.16424

Rehnus, M.; Bollmann, K.; Gugerli, F.; Brodbeck, S.; Schenker, L., 2022: Le lièvre variable: dynamique de population et utilisation de l'habitat. Schneehase: Bestandesschwankungen und Lebensraumnutzung. Fauna.vs-Info, 2-7.

Kessler, C.; Brambilla, A.; Waldvogel, D.; Camenisch, G.; Biebach, I.; Leigh, D.M.; Grossen, C.; Croll, D., 2022: A robust sequencing assay of a thousand amplicons for the high‐throughput population monitoring of Alpine ibex immunogenetics. Molecular Ecology Resources, 22, 1: 66-85. doi: 10.1111/1755-0998.13452

Staubli, F.; Imola, L.; Dauphin, B.; Molinier, V.; Pfister, S.; Piñuela, Y.; Schürz, L.; Sproll, L.; Steidinger, B.S.; Stobbe, U.; Tegel, W.; Büntgen, U.; Egli, S.; Peter, M., 2022: Hidden fairy rings and males - genetic patterns of natural Burgundy truffle (Tuber aestivum Vittad.) populations reveal new insights into its life cycle. Environmental Microbiology, 24, 12: 6376-6391. doi: 10.1111/1462-2920.16131

Peter, M.; Treindl, A., 2022: Mykorrhizapilze - die geheimen Helfer im Wald. Bündnerwald, 75, 6: 40-46.

Kersten, B.; Rellstab, C.; Schroeder, H.; Brodbeck, S.; Fladung, M.; Krutovsky, K.V.; Gugerli, F., 2022: The mitochondrial genome sequence of Abies alba Mill. reveals a high structural and combinatorial variation. BMC Genomics, 23: 776 (15 pp.). doi: 10.1186/s12864-022-08993-9

Leigh, D.M.; Kersten, O.; Star, B.; Anker‐Nilssen, T.; Burnham, K.; Johnson, J.; Provencher, J.; Boessenkool, S., 2022: Sympatry of genetically distinct Atlantic Puffins (Fratercula arctica) in the High Arctic. Ibis, doi: 10.1111/ibi.13153

Dauphin, B.; Rellstab, C.; Wüest, R.O.; Karger, D.N.; Holderegger, R.; Gugerli, F.; Manel, S., 2022: Re-thinking the environment in landscape genomics. Trends in Ecology and Evolution, doi: 10.1016/j.tree.2022.10.010

Wraase, L.; Reuber, V.M.; Kurth, P.; Fekadu, M.; Demissew, S.; Miehe, G.; Opgenoorth, L.; Selig, U.; Woldu, Z.; Zeuss, D.; Schabo, D.G.; Farwig, N.; Nauss, T., 2022: Remote sensing-supported mapping of the activity of a subterranean landscape engineer across an afro-alpine ecosystem. Remote Sensing in Ecology and Conservation, (15 pp.). doi: 10.1002/rse2.303

Gugerli, F.; Brodbeck, S.; Bebi, P.; Bollmann, K.; Dauphin, B.; Gossner, M.; Krumm, F.; Peter, M.; Queloz, V.; Reiss, G.; Rellstab, C.; Stofer, S.; Von Arx, G.; Wasem, U.; Zweifel, R., 2022: L'arole - portrait d'un montagnard. Notice pour le praticien, 72. 16 p. doi: 10.55419/wsl:31960

Gugerli, F.; Brodbeck, S.; Bebi, P.; Bollmann, K.; Dauphin, B.; Gossner, M.; Krumm, F.; Peter, M.; Queloz, V.; Reiss, G.; Rellstab, C.; Stofer, S.; Von Arx, G.; Wasem, U.; Zweifel, R., 2022: Die Arve - Portrait eines Gebirgswaldbaums. Merkblatt für die Praxis, 72. 16 p. doi: 10.55419/wsl:31959

Zacharias, M.; Pampuch, T.; Dauphin, B.; Opgenoorth, L.; Roland, C.; Schnittler, M.; Wilmking, M.; Bog, M.; Heer, K., 2022: Genetic basis of growth reaction to drought stress differs in contrasting high-latitude treeline ecotones of a widespread conifer. Molecular Ecology, 31, 20: 5165-5181. doi: 10.1111/mec.16648

Jensen, E.L.; Leigh, D.M., 2022: Using temporal genomics to understand contemporary climate change responses in wildlife. Ecology and Evolution, 12, 9: e9340 (8 pp.). doi: 10.1002/ece3.9340

Gugerli, F.; Folly, C.; Kramer, M.; Brodbeck, S.; Graf, R.; Csilléry, K.; Opgenoorth, L.; Sperisen, C.; Martínez-Sancho, E.; Rellstab, C., 2022: Dank genetischer Vielfalt ist die Weisstanne fit für die Zukunft. Wald und Holz, 103, 11: 11-14.

Gugerli, F.; Folly, C.; Kramer, M.; Brodbeck, S.; Graf, R.; Csilléry, K.; Opgenoorth, L.; Sperisen, C.; Martínez-Sancho, E.; Rellstab, C., 2022: Grâce à sa diversité génétique, le sapin est paré pour l'avenir. La Forêt, 75, 11: 9-12.

Bose, A.K.; Rigling, A.; Gessler, A.; Hagedorn, F.; Brunner, I.; Feichtinger, L.; Bigler, C.; Egli, S.; Etzold, S.; Gossner, M.M.; Guidi, C.; Lévesque, M.; Meusburger, K.; Peter, M.; Saurer, M.; Scherrer, D.; Schleppi, P.; Schönbeck, L.; Vogel, M.E.; ... Schaub, M., 2022: Lessons learned from a long‐term irrigation experiment in a dry Scots pine forest: impacts on traits and functioning. Ecological Monographs, 92, 2: e1507 (18 pp.). doi: 10.1002/ecm.1507

Tsykun, T.; Prospero, S.; Schoebel, C.N.; Rea, A.; Burgess, T.I., 2022: Global invasion history of the emerging plant pathogen Phytophthora multivora. BMC Genomics, 23: 153 (16 pp.). doi: 10.1186/s12864-022-08363-5

Schwörer, C.; Leunda, M.; Alvarez, N.; Gugerli, F.; Sperisen, C., 2022: The untapped potential of macrofossils in ancient plant DNA research. New Phytologist, 235, 2: 391-401. doi: 10.1111/nph.18108

Wötzel, S.; Andrello, M.; Albani, M.C.; Koch, M.A.; Coupland, G.; Gugerli, F., 2022: Arabis alpina: a perennial model plant for ecological genomics and life‐history evolution. Molecular Ecology Resources, 22, 2: 468-486. doi: 10.1111/1755-0998.13490

Mossion, V.; Dauphin, B.; Grant, J.; Kessler, M.; Zemp, N.; Croll, D., 2022: Transcriptome‐wide SNPs for Botrychium lunaria ferns enable fine‐grained analysis of ploidy and population structure. Molecular Ecology Resources, 22, 1: 254-271. doi: 10.1111/1755-0998.13478

Fonti, P.; Rellstab, C.; Martínez-Sancho, E., 2022: Deciphering 'time to hydraulic failure' to select drought-resistant tree provenances. Tree Physiology, 42, 4: 704-707. doi: 10.1093/treephys/tpac010

Neophytou, C.; Heer, K.; Milesi, P.; Peter, M.; Pyhäjärvi, T.; Westergren, M.; Rellstab, C.; Gugerli, F., 2022: Genomics and adaptation in forest ecosystems. Tree Genetics and Genomes, 18: 12 (7 pp.). doi: 10.1007/s11295-022-01542-1

Rehnus, M.; Bollmann, K.; Gugerli, F.; Brodbeck, S.; Schenker, L., 2022: Schneehase. Bestandsdynamik und geschlechterspezifische Lebensraumnutzung. Jagd in Tirol, 74, 1: 12-17.

Leigh, D.M.; Peranić, K.; Prospero, S.; Cornejo, C.; Crossed Dsignurković-Perica, M.; Kupper, Q.; Nuskern, L.; Rigling, D.; Jeić, M., 2021: Long-read sequencing reveals the evolutionary drivers of intra-host diversity across natural RNA mycovirus infections. Virus Evolution, 7, 2: 1-14. doi: 10.1093/ve/veab101

Opgenoorth, L.; Dauphin, B.; Benavides, R.; Heer, K.; Alizoti, P.; Martínez-Sancho, E.; Alía, R.; Ambrosio, O.; Audrey, A.; Auñón, F.; Beffa, G.; Brodbeck, S.; Di Gerardi, N.; Fonti, P.; Graf, R.; Gugerli, F.; Meier, B.; Marchon, J.; Morganti, S.; ... Cavers, S., 2021: The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species. GigaScience, 10: 1-13. doi: 10.1093/gigascience/giab010

Zweifel, R.; Etzold, S.; Basler, D.; Bischoff, R.; Braun, S.; Buchmann, N.; Conedera, M.; Fonti, P.; Gessler, A.; Haeni, M.; Hoch, G.; Kamen, A.; Koechli, R.; Maeder, M.; Nievergelt, D.; Peter, M.; Peters, R.L.; Schaub, M.; Trotsiuk, V.; ... Eugster, W., 2021: TreeNet - the biological drought and growth indicator network. Frontiers in Forests and Global Change, 4: 776905 (14 pp.). doi: 10.3389/ffgc.2021.776905

Ramírez-Valiente, J.A.; Solé-Medina, A.; Pyhäjärvi, T.; Savolainen, O.; Heer, K.; Opgenoorth, L.; Danusevicius, D.; Robledo-Arnuncio, J.J., 2021: Adaptive responses to temperature and precipitation variation at the early-life stages of Pinus sylvestris. New Phytologist, 232, 4: 1632-1647. doi: 10.1111/nph.17678

Martínez-Sancho, E.; Rellstab, C.; Guillaume, F.; Bigler, C.; Fonti, P.; Wohlgemuth, T.; Vitasse, Y., 2021: Post-glacial re-colonization and natural selection have shaped growth responses of silver fir across Europe. Science of the Total Environment, 779: 146393 (11 pp.). doi: 10.1016/j.scitotenv.2021.146393

Fischer, M.C.; Ruprecht, K.; Gugerli, F.; Holderegger, R.; Widmer, A., 2021: Pilotstudie für ein Monitoring der genetischen Vielfalt in der Schweiz. Études pilotes sur le monitoring de la diversité génétique en Suisse. Nature et Paysage. Natur und Landschaft: Inside, 11-13.

Valdés-Correcher, E.; Moreira, X.; Augusto, L.; Barbaro, L.; Bouget, C.; Bouriaud, O.; Branco, M.; Centenaro, G.; Csóka, G.; Damestoy, T.; Dobrosavljević, J.; Duduman, M.; Dulaurent, A.; Eötvös, C.B.; Faticov, M.; Ferrante, M.; Fürjes-Mikó, Á.; Galmán, A.; Gossner, M.M.; ... Castagneyrol, B., 2021: Search for top-down and bottom-up drivers of latitudinal trends in insect herbivory in oak trees in Europe. Global Ecology and Biogeography, 30: 651-665. doi: 10.1111/geb.13244

Major, E.I.; Höhn, M.; Avanzi, C.; Fady, B.; Heer, K.; Opgenoorth, L.; Piotti, A.; Popescu, F.; Postolache, D.; Vendramin, G.G.; Csilléry, K., 2021: Fine-scale spatial genetic structure across the species range reflects recent colonization of high elevation habitats in silver fir (Abies alba Mill.). Molecular Ecology, 30, 20: 5247-5265. doi: 10.1111/mec.16107

Dauphin, B.; De Freitas Pereira, M.; Kohler, A.; Grigoriev, I.V.; Barry, K.; Na, H.; Amirebrahimi, M.; Lipzen, A.; Martin, F.; Peter, M.; Croll, D., 2021: Cryptic genetic structure and copy‐number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum. Environmental Microbiology, 23, 11: 6536-6556. doi: 10.1111/1462-2920.15752

Benavides, R.; Carvalho, B.; Bastias, C.C.; López‐Quiroga, D.; Mas, A.; Cavers, S.; Gray, A.; Albet, A.; Alía, R.; Ambrosio, O.; Dauphin, B.; Fonti, P.; Graf, R.; Gugerli, F.; Marchon, J.; Martínez‐Sancho, E.; Morganti, S.; Opgenoorth, L.; Rellstab, C.; Valladares, F., 2021: The GenTree leaf collection: inter‐ and intraspecific leaf variation in seven forest tree species in Europe. Global Ecology and Biogeography, 30, 3: 590-597. doi: 10.1111/geb.13239

Opgenoorth, L.; Hofmann, S.; Schmidt, J., 2021: Rewinding the molecular clock in the genus Carabus (Coleoptera: Carabidae) in light of fossil evidence and the Gondwana split: a reanalysis. PLoS One, 16, 9: e0256679 (21 pp.). doi: 10.1371/journal.pone.0256679

Hagedorn, F.; Solly, E.; Frey, B.; Rixen, Ch.; Hartmann, M.; Peter, M., 2021: Bodenpilze reagieren empfindlich auf den Klimawandel. Bündnerwald, 74, 5: 48-51.

Rellstab, C.; Dauphin, B.; Exposito-Alonso, M., 2021: Prospects and limitations of genomic offset in conservation management. Evolutionary Applications, 14, 5: 1202-1212. doi: 10.1111/eva.13205

Guillaume, A.S.; Leempoel, K.; Rochat, E.; Rogivue, A.; Kasser, M.; Gugerli, F.; Parisod, C.; Joost, S., 2021: Multiscale very high resolution topographic models in alpine ecology: pros and cons of airborne LiDAR and drone-based stereo-photogrammetry technologies. Remote Sensing, 13, 8: 1588 (18 pp.). doi: 10.3390/rs13081588

Kuo, L.; Tang, S.K.; Kao, T.; Ebihara, A.; Fawcett, S.; Hsiao, M.; Shinohara, W.; Dauphin, B., 2021: A dormant resource for genome size estimation in ferns: C‐value inference of the Ophioglossaceae using herbarium specimen spores. Applications in Plant Sciences, 9, 11-12: e11452 (9 pp.). doi: 10.1002/aps3.11452

Minter, M.; Nielsen, E.S.; Blyth, C.; Bertola, L.D.; Kantar, M.B.; Morales, H.E.; Orland, C.; Segelbacher, G.; Leigh, D.M., 2021: What is genetic diversity and why does it matter?. Frontiers for Young Minds, 9: 656168 (9 pp.). doi: 10.3389/frym.2021.656168

Leigh, D.M.; Van Rees, C.B.; Millette, K.L.; Breed, M.F.; Schmidt, C.; Bertola, L.D.; Hand, B.K.; Hunter, M.E.; Jensen, E.L.; Kershaw, F.; Liggins, L.; Luikart, G.; Manel, S.; Mergeay, J.; Miller, J.M.; Segelbacher, G.; Hoban, S.; Paz-Vinas, I., 2021: Opportunities and challenges of macrogenetic studies. Nature Reviews Genetics, 22: 791-807. doi: 10.1038/s41576-021-00394-0

Leigh, D.M.; Lischer, H.E.L.; Guillaume, F.; Grossen, C.; Günther, T., 2021: Disentangling adaptation from drift in bottlenecked and reintroduced populations of Alpine ibex. Molecular Ecology Resources, 21, 7: 2350-2363. doi: 10.1111/1755-0998.13442

Rellstab, C.; Gugerli, F.; Senn, S. (eds), 2021: Genomics and adaptation in forest ecosystems. Book of abstracts. EVOLTREE conference 2021, Birmensdorf. 91 p. doi: 10.16904/envidat.243

Büntgen, U.; Peter, M.; Tegel, W.; Stobbe, U.; Elburg, R.; Sproll, L.; Molinier, V.; Čejka, T.; Isaac, E.L.; Egli, S., 2021: Eco-archaeological excavation techniques reveal snapshots of subterranean truffle growth. Fungal Biology, 125, 12: 951-961. doi: 10.1016/j.funbio.2021.09.001

Dietrich, C.C.; Tandy, S.; Murawska-Wlodarczyk, K.; Banaś, A.; Korzeniak, U.; Seget, B.; Babst-Kostecka, A., 2021: Phytoextraction efficiency of Arabidopsis halleri is driven by the plant and not by soil metal concentration. Chemosphere, 285: 131437 (10 pp.). doi: 10.1016/j.chemosphere.2021.131437

Pärli, R.; Lieberherr, E.; Holderegger, R.; Gugerli, F.; Widmer, A.; Fischer, M.C., 2021: Developing a monitoring program of genetic diversity: what do stakeholders say?. Conservation Genetics, 22: 673-684. doi: 10.1007/s10592-021-01379-6

Opgenoorth, L.; Rellstab, C., 2021: Tackling the challenges of evolutionary forest research with multidata approaches. Molecular Ecology, 30, 16: 3893-3895. doi: 10.1111/mec.16031

Kersten, O.; Star, B.; Leigh, D.M.; Anker-Nilssen, T.; Strøm, H.; Danielsen, J.; Descamps, S.; Erikstad, K.E.; Fitzsimmons, M.G.; Fort, J.; Hansen, E.S.; Harris, M.P.; Irestedt, M.; Kleven, O.; Mallory, M.L.; Jakobsen, K.S.; Boessenkool, S., 2021: Complex population structure of the Atlantic puffin revealed by whole genome analyses. Communications Biology, 4, 1: 922 (12 pp.). doi: 10.1038/s42003-021-02415-4

Paz-Vinas, I.; Jensen, E.L.; Bertola, L.D.; Breed, M.F.; Hand, B.K.; Hunter, M.E.; Kershaw, F.; Leigh, D.M.; Luikart, G.; Mergeay, J.; Miller, J.M.; Van Rees, C.B.; Segelbacher, G.; Hoban, S., 2021: Macrogenetic studies must not ignore limitations of genetic markers and scale. Ecology Letters, 24, 6: 1282-1284. doi: 10.1111/ele.13732

Ramírez‐Valiente, J.A.; Solé‐Medina, A.; Pyhäjärvi, T.; Savolainen, O.; Cervantes, S.; Kesälahti, R.; Kujala, S.T.; Kumpula, T.; Heer, K.; Opgenoorth, L.; Siebertz, J.; Danusevicius, D.; Notivol, E.; Benavides, R.; Robledo‐Arnuncio, J.J., 2021: Selection patterns on early‐life phenotypic traits in Pinus sylvestris are associated with precipitation and temperature along a climatic gradient in Europe. New Phytologist, 229, 5: 3009-3025. doi: 10.1111/nph.17029

Rellstab, C., 2021: Genomics helps to predict maladaptation to climate change. Nature Climate Change, 11: 85-86. doi: 10.1038/s41558-020-00964-w

Schenker, L.; Bollmann, K.; Rehnus, M.; Brodbeck, S.; Gugerli, F., 2020: Hare's affairs: lessons learnt from a noninvasive genetic monitoring for tracking mountain hare individuals. Ecology and Evolution, 10, 18: 10150-10166. doi: 10.1002/ece3.6676

Dauphin, B.; Rellstab, C.; Schmid, M.; Zoller, S.; Karger, D.N.; Brodbeck, S.; Guillaume, F.; Gugerli, F., 2020: Genomic vulnerability to rapid climate warming in a tree species with a long generation time. Global Change Biology, 27, 6: 1181-1195. doi: 10.1111/gcb.15469

Dauphin, B.; Wüest, R.O.; Brodbeck, S.; Zoller, S.; Fischer, M.C.; Holderegger, R.; Gugerli, F.; Rellstab, C., 2020: Disentangling the effects of geographic peripherality and habitat suitability on neutral and adaptive genetic variation in Swiss stone pine. Molecular Ecology, 29, 11: 1972-1989. doi: 10.1111/mec.15467

Csilléry, K.; Ovaskainen, O.; Sperisen, C.; Buchmann, N.; Widmer, A.; Gugerli, F., 2020: Adaptation to local climate in multi-trait space: evidence from silver fir (Abies alba Mill.) populations across a heterogeneous environment. Heredity, 124: 77-92. doi: 10.1038/s41437-019-0240-0

Reutimann, O.; Gugerli, F.; Rellstab, C., 2020: L'empreinte génétique, un outil d'identification de l'espèce et du taux de mélange des chênes indigènes. La Forêt, 73, 5: 14-17.

Schenker, L.; Brodbeck, S.; Bollmann, K.; Rehnus, M.; Gugerli, F., 2020: Nicht-invasives genetisches Monitoring: Einblick in das Leben heimlicher Tierarten. Monitoring génétique non invasif: bref aperçu de la vie d'espèces animales discrètes. Nature et Paysage. Natur und Landschaft: Inside, 33-39.

Martínez-Sancho, E.; Slámová, L.; Morganti, S.; Grefen, C.; Carvalho, B.; Dauphin, B.; Rellstab, C.; Gugerli, F.; Opgenoorth, L.; Heer, K.; Von Arx, G.; Fonti, P., 2020: The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe. Scientific Data, 7: 1 (7 pp.). doi: 10.1038/s41597-019-0340-y

Waldvogel, A.; Feldmeyer, B.; Rolshausen, G.; Exposito-Alonso, M.; Rellstab, C.; Kofler, R.; Mock, T.; Schmid, K.; Schmitt, I.; Bataillon, T.; Savolainen, O.; Bergland, A.; Flatt, T.; Guillaume, F.; Pfenninger, M., 2020: Evolutionary genomics can improve prediction of species' responses to climate change. Evolution Letters, 4, 1: 4-18. doi: 10.1002/evl3.154

Solé-Medina, A.; Heer, K.; Opgenoorth, L.; Kaldewey, P.; Danusevicius, D.; Notivol, E.; Robledo-Arnuncio, J.J.; Ramírez-Valiente, J.A., 2020: Genetic variation in early fitness traits across European populations of silver birch (Betula pendula). AoB PLANTS, 12, 3: 1-13. doi: 10.1093/aobpla/plaa019

Sandoz, F.A.; Bindschedler, S.; Dauphin, B.; Farinelli, L.; Grant, J.R.; Hervé, V., 2020: Biotic and abiotic factors shape arbuscular mycorrhizal fungal communities associated with the roots of the widespread fern Botrychium lunaria (Ophioglossaceae). Environmental Microbiology Reports, 12, 3: 342-354. doi: 10.1111/1758-2229.12840

Rellstab, C.; Zoller, S.; Sailer, C.; Tedder, A.; Gugerli, F.; Shimizu, K.K.; Holderegger, R.; Widmer, A.; Fischer, M.C., 2020: Genomic signatures of convergent adaptation to Alpine environments in three Brassicaceae species. Molecular Ecology, 29, 22: 4350-4365. doi: 10.1111/mec.15648

Miyauchi, S.; Kiss, E.; Kuo, A.; Drula, E.; Kohler, A.; Sánchez-García, M.; Morin, E.; Andreopoulos, B.; Barry, K.W.; Bonito, G.; Peter, M.; Pfister, S.; Martin, F.M., 2020: Large-scale genome sequencing of mycorrhizal fungi provides insights into the early evolution of symbiotic traits. Nature Communications, 11: 5125 (17 pp.). doi: 10.1038/s41467-020-18795-w

Leigh, D.M.; Schefer, C.; Cornejo, C., 2020: Determining the suitability of MinION's direct RNA and DNA amplicon sequencing for viral subtype identification. Viruses, 12, 8: 801 (11 pp.). doi: 10.3390/v12080801

Joseph, J.; Gao, D.; Backes, B.; Bloch, C.; Brunner, I.; Gleixner, G.; Haeni, M.; Hartmann, H.; Hoch, G.; Hug, C.; Kahmen, A.; Lehmann, M.M.; Li, M.; Luster, J.; Peter, M.; Poll, C.; Rigling, A.; Rissanen, K.A.; Ruehr, N.K.; ... Gessler, A., 2020: Rhizosphere activity in an old-growth forest reacts rapidly to changes in soil moisture and shapes whole-tree carbon allocation. Proceedings of the National Academy of Sciences of the United States of America PNAS, 117, 40: 24885-24892. doi: 10.1073/pnas.2014084117

Dauphin, B.; Grant, J.R.; Farrar, D.R., 2020: Outcrossing mating system of the early-divergent moonwort fern (Botrychium lunaria, ophioglossaceae) revealed in the european alps. International Journal of Plant Sciences, 181, 9: 926-936. doi: 10.1086/710491

Bose, A.K.; Moser, B.; Rigling, A.; Lehmann, M.M.; Milcu, A.; Peter, M.; Rellstab, C.; Wohlgemuth, T.; Gessler, A., 2020: Memory of environmental conditions across generations affects the acclimation potential of scots pine. Plant, Cell and Environment, 43, 5: 1288-1299. doi: 10.1111/pce.13729

Schenker-Schürz, L.; Rehnus, M.; Brodbeck, S.; Bollmann, K.; Gugerli, F., 2020: Neue Erkenntnisse dank genetischen Methoden. Cratschla, 18-21.

Fady, B.; Aravanopoulos, F.; Benavides, R.; González-Martínez, S.; Grivet, D.; Lascoux, M.; Lindner, M.; Rellstab, C.; Valladares, F.; Vinceti, B., 2020: Genetics to the rescue: managing forests sustainably in a changing world. Tree Genetics and Genomes, 16, 6: 80 (11 pp.). doi: 10.1007/s11295-020-01474-8

Estravis-Barcala, M.; Mattera, M.G.; Soliani, C.; Bellora, N.; Opgenoorth, L.; Heer, K.; Arana, M.V.; Gutiérrez, R., 2020: Molecular bases of responses to abiotic stress in trees. Journal of Experimental Botany, 71, 13: 3765-3779. doi: 10.1093/jxb/erz532

Holderegger, R.; Schmidt, B.R.; Grünig, C.; Meier, R.; Csencsics, D.; Gassner, M.; Rellstab, C.; Stapfer, A., 2020: Ready-to-use workflows for the implementation of genetic tools in conservation management. Conservation Genetics Resources, 12: 691-700. doi: 10.1007/s12686-020-01165-5

Bonfils, P.; Horisberger, D.; Ayé, R.; Junod, P.; Tiefenbacher, E.; Pleines, V.; Studhalter, S.; Rellstab, C., 2020: Eiche fördern, heisst Eiche kennen. Bündnerwald, 73, 3: 8-13.

Trivellone, V.; Meier, M.; Cara, C.; Pollini Paltrinieri, L.; Gugerli, F.; Moretti, M.; Wolf, S.; Collatz, J., 2020: Multiscale determinants drive parasitization of drosophilidae by hymenopteran parasitoids in agricultural landscapes. Insects, 11, 6: 334 (18 pp.). doi: 10.3390/insects11060334

García de Jalón, L.; Limousin, J.; Richard, F.; Gessler, A.; Peter, M.; Hättenschwiler, S.; Milcu, A., 2020: Microhabitat and ectomycorrhizal effects on the establishment, growth and survival of Quercus ilex L. seedlings under drought. PLoS One, 15, 6: e0229807 (18 pp.). doi: 10.1371/journal.pone.0229807

Reutimann, O.; Gugerli, F.; Rellstab, C., 2020: Genetische Fingerabdrücke zur Bestimmung von Eichenarten. Wald und Holz, 101, 6: 21-25.

Li, Q.; Guo, X.; Niu, J.; Duojie, D.; Li, X.; Opgenoorth, L.; Zou, J., 2020: Molecular phylogeography and evolutionary history of the endemic species Corydalis hendersonii (Papaveraceae) on the Tibetan plateau inferred from chloroplast DNA and ITS sequence variation. Frontiers in Plant Science, 11: 436 (16 pp.). doi: 10.3389/fpls.2020.00436

Avanzi, C.; Heer, K.; Büntgen, U.; Labriola, M.; Leonardi, S.; Opgenoorth, L.; Piermattei, A.; Urbinati, C.; Vendramin, G.G.; Piotti, A., 2020: Individual reproductive success in Norway spruce natural populations depends on growth rate, age and sensitivity to temperature. Heredity, 124: 685-698. doi: 10.1038/s41437-020-0305-0

Castagneyrol, B.; Valdés-Correcher, E.; Bourdin, A.; Barbaro, L.; Bouriaud, O.; Branco, M.; Centenaro, G.; Csóka, G.; Duduman, M.; Dulaurent, A.; Eötvös, C.B.; Faticov, M.; Ferrante, M.; Fürjes-Mikó, Á.; Galmán, A.; Gossner, M.M.; Harvey, D.; Howe, A.G.; Kaennel-Dobbertin, M.; ... Tack, A.J.M., 2020: Can school children support ecological research? Lessons from the Oak Bodyguard citizen science project. Citizen Science: Theory and Practice, 5, 1: 10 (11 pp.). doi: 10.5334/cstp.267

Rogivue, A.; Choudhury, R.R.; Zoller, S.; Joost, S.; Felber, F.; Kasser, M.; Parisod, C.; Gugerli, F., 2019: Genome‐wide variation in nucleotides and retrotransposons in alpine populations ofArabis alpina (Brassicaceae). Molecular Ecology Resources, 19, 3: 773-787. doi: 10.1111/1755-0998.12991

Rellstab, C.; Dauphin, B.; Zoller, S.; Brodbeck, S.; Gugerli, F., 2019: Using transcriptome sequencing and pooled exome capture to study local adaptation in the giga‐genome of Pinus cembra. Molecular Ecology Resources, 19, 2: 536-551. doi: 10.1111/1755-0998.12986

Leigh, D.M.; Hendry, A.P.; Vázquez‐Domínguez, E.; Friesen, V.L., 2019: Estimated six per cent loss of genetic variation in wild populations since the industrial revolution. Evolutionary Applications, 12, 8: 1505-1512. doi: 10.1111/eva.12810

Ossendorf, G.; Groos, A.R.; Bromm, T.; Tekelemariam, M.G.; Glaser, B.; Lesur, J.; Schmidt, J.; Akçar, N.; Bekele, T.; Beldados, A.; Demissew, S.; Kahsay, T.H.; Nash, B.P.; Nauss, T.; Negash, A.; Nemomissa, S.; Veit, H.; Vogelsang, R.; Woldu, Z.; ... Miehe, G., 2019: Middle Stone Age foragers resided in high elevations of the glaciated Bale Mountains, Ethiopia. Science, 365, 6453: 583-587. doi: 10.1126/science.aaw8942

Choudhury, R.R.; Rogivue, A.; Gugerli, F.; Parisod, C., 2019: Impact of polymorphic transposable elements on linkage disequilibrium along chromosomes. Molecular Ecology, 28, 6: 1550-1562. doi: 10.1111/mec.15014

Mosca, E.; Cruz, F.; Gómez-Garrido, J.; Bianco, L.; Rellstab, C.; Brodbeck, S.; Csilléry, K.; Fady, B.; Fladung, M.; Fussi, B.; Gömöry, D.; González-Martínez, S.C.; Grivet, D.; Gut, M.; Hansen, O.K.; Heer, K.; Kaya, Z.; Krutovsky, K.V.; Kersten, B.; ... Neale, D.B., 2019: A reference genome sequence for the European silver fir (Abies alba Mill.): a community-generated genomic resource. G3: Genes, Genomes, Genetics, 9, 7: 2039-2049. doi: 10.1534/g3.119.400083

Birchard, K.L.; Leigh, D.M., 2019: The importance of keeping time with our internal clocks. Frontiers for Young Minds, 7: 72 (7 pp.). doi: 10.3389/frym.2019.00072

Büntgen, U.; Lendorff, H.; Lendorff, A.; Leuchtmann, A.; Peter, M.; Bagi, I.; Egli, S., 2019: Truffles on the move. Frontiers in Ecology and the Environment, 17, 4: 200-202. doi: 10.1002/fee.2033

Gugerli, F.; Moretti, M.; Graf, R.; Maier, M.; Cara, C.; Collatz, J.; Trivellone, V., 2019: Genetische Vielfalt von Trichopria drosophilae, einem Feind der Kirschessigfliege. Agrarforschung Schweiz, 10, 10: 396-401.

Holderegger, R.; Balkenhol, N.; Bolliger, J.; Engler, J.O.; Gugerli, F.; Hochkirch, A.; Nowak, C.; Segelbacher, G.; Widmer, A.; Zachos, F.E., 2019: Conservation genetics: linking science with practice. Molecular Ecology, 28, 17: 3848-3856. doi: 10.1111/mec.15202

Rigling, D.; Buser, C.; Cornejo, C.; Dubach, V.; Hölling, D.; Meyer, J.B.; Prospero, S.; Schneider, S.; Queloz, V., 2019: Überwachung von besonders gefährlichen Schadorganismen für den Wald – Jahresbericht 2018. 53 p.

Collado, E.; Bonet, J.A.; Camarero, J.J.; Egli, S.; Peter, M.; Salo, K.; Martínez-Peña, F.; Ohenoja, E.; Martín-Pinto, P.; Primicia, I.; Büntgen, U.; Kurttila, M.; Oria-de-Rueda, J.A.; Martínez-de-Aragón, J.; Miina, J.; De-Miguel, S., 2019: Mushroom productivity trends in relation to tree growth and climate across different European forest biomes. Science of the Total Environment, 689: 602-615. doi: 10.1016/j.scitotenv.2019.06.471

Büntgen, U.; Jäggi, M.; Egli, S.; Heule, M.; Peter, M.; Zagyva, I.; Krusic, P.J.; Zimermann, S.; Bagi, I., 2019: No radioactive contamination from the Chernobyl disaster in Hungarian white truffles (Tuber magnatum). Environmental Pollution, 252: 1643-1647. doi: 10.1016/j.envpol.2019.06.108

Splivallo, R.; Vahdatzadeh, M.; Maciá-Vicente, J.G.; Molinier, V.; Peter, M.; Egli, S.; Uroz, S.; Paolocci, F.; Deveau, A., 2019: Orchard conditions and fruiting body characteristics drive the microbiome of the black truffle Tuber aestivum. Frontiers in Microbiology, 10: 1437 (15 pp.). doi: 10.3389/fmicb.2019.01437

Ruffner, B.; Rigling, D.; Schoebel, C.N., 2019: Multispecies Phytophthora disease patterns in declining beech stands. Forest Pathology, 49, 3: e12514 (9 pp.). doi: 10.1111/efp.12514

Neuschulz, E.L.; Merges, D.; Bollmann, K.; Gugerli, F.; Böhning-Gaese, K., 2018: Biotic interactions and seed deposition rather than abiotic factors determine recruitment at elevational range limits of an alpine tree. Journal of Ecology, 106, 3: 948-959. doi: 10.1111/1365-2745.12818

Schoville, S.D.; Dalongeville, A.; Viennois, G.; Gugerli, F.; Taberlet, P.; Lequette, B.; Alvarez, N.; Manel, S., 2018: Preserving genetic connectivity in the European Alps protected area network. Biological Conservation, 218: 99-109. doi: 10.1016/j.biocon.2017.12.017

Rogivue, A.; Graf, R.; Parisod, C.; Holderegger, R.; Gugerli, F., 2018: The phylogeographic structure of Arabis alpina in the Alps shows consistent patterns across different types of molecular markers and geographic scales. Alpine Botany, 128, 1: 35-45. doi: 10.1007/s00035-017-0196-8

Lendvay, B.; Hartmann, M.; Brodbeck, S.; Nievergelt, D.; Reinig, F.; Zoller, S.; Parducci, L.; Gugerli, F.; Büntgen, U.; Sperisen, C., 2018: Improved recovery of ancient DNA from subfossil wood – application to the world's oldest Late Glacial pine forest. New Phytologist, 217, 4: 1737-1748. doi: 10.1111/nph.14935

Csilléry, K.; Rodríguez-Verdugo, A.; Rellstab, C.; Guillaume, F., 2018: Detecting the genomic signal of polygenic adaptation and the role of epistasis in evolution. Molecular Ecology, 27, 3: 606-612. doi: 10.1111/mec.14499

Schoebel, C.N.; Prospero, S.; Gross, A.; Rigling, D., 2018: Detection of a conspecific mycovirus in two closely related native and introduced fungal hosts and evidence for interspecific virus transmission. Viruses, 10, 11: 628 (13 pp.). doi: 10.3390/v10110628

Sailer, C.; Babst-Kostecka, A.; Fischer, M.C.; Zoller, S.; Widmer, A.; Vollenweider, P.; Gugerli, F.; Rellstab, C., 2018: Transmembrane transport and stress response genes play an important role in adaptation of Arabidopsis halleri to metalliferous soils. Scientific Reports, 8: 16085 (13 pp.). doi: 10.1038/s41598-018-33938-2

Buser, C., 2018: Eine Gefahr für Ziersträucher und Waldbäume. g'plus: Magazin für die grüne Branche, 22-23.

Buser-Schoebel, C., 2018: Phytophtora an Gehölzen. g'plus: Magazin für die grüne Branche, 2-3.

Queloz, V.; Buser, C.; Dubach, V.; Hölling, D.; Meyer, J.B.; Schneider, S.; Prospero, S.; Cornejo, C.; Rigling, D., 2018: Überwachung von besonders gefährlichen Schadorganismen für den Wald – Jahresbericht 2017. 48 p.

Queloz, V. (Ed.); Dubach, V. (Ed.); Dubach, V.; Beenken, L.; Buser, C.; Forster, B.; Hölling, D.; Meier, F.; Meyer, J.B.; Odermatt, O.; Queloz, V.; Ruffner, B.; Schneider, S.; Stroheker, S., 2018: Situazione fitosanitaria dei boschi 2017. WSL Berichte, 70. 35 p.

Queloz, V. (Ed.); Dubach, V. (Ed.); Dubach, V.; Beenken, L.; Buser, C.; Forster, B.; Hölling, D.; Meier, F.; Meyer, J.B.; Odermatt, O.; Queloz, V.; Ruffner, B.; Schneider, S.; Stroheker, S., 2018: Protection des forêts - vue d'ensemble 2017. WSL Berichte, 68. 35 p.

Queloz, V. (Ed.); Dubach, V. (Ed.); Dubach, V.; Beenken, L.; Buser, C.; Forster, B.; Hölling, D.; Meier, F.; Meyer, J.B.; Odermatt, O.; Queloz, V.; Ruffner, B.; Schneider, S.; Stroheker, S., 2018: Waldschutzüberblick 2017. WSL Berichte, 67. 35 p.

Luqman, H.; Muller, R.; Vaupel, A.; Brodbeck, S.; Bolliger, J.; Gugerli, F., 2018: No distinct barrier effects of highways and a wide river on the genetic structure of the Alpine newt (Ichthyosaura alpestris) in densely settled landscapes. Conservation Genetics, 19, 3: 673-685. doi: 10.1007/s10592-018-1046-y

Rigling, D.; Hilfiker, S.; Schöbel, C.; Meier, F.; Engesser, R.; Scheidegger, C.; Stofer, S.; Senn-Irlet, B.; Queloz, V., 2018: Il deperimento del frassino. Biologia, sintomi e raccomandazioni per la gestione. Notizie per la pratica, 57. 8 p.

De Freitas Pereira, M.; Veneault-Fourrey, C.; Vion, P.; Guinet, F.; Morin, E.; Barry, K.W.; Lipzen, A.; Singan, V.; Pfister, S.; Na, H.; Kennedy, M.; Egli, S.; Grigoriev, I.; Martin, F.; Kohler, A.; Peter, M., 2018: Secretome analysis from the ectomycorrhizal ascomycete Cenococcum geophilum. Frontiers in Microbiology, 9: 141 (17 pp.). doi: 10.3389/fmicb.2018.00141

Tsykun, T.; Rellstab, C.; Dutech, C.; Sipos, G.; Prospero, S., 2017: Comparative assessment of SSR and SNP markers for inferring the population genetic structure of the common fungus Armillaria cepistipes. Heredity, 119, 5: 371-380. doi: 10.1038/hdy.2017.48

Schoebel, C.N.; Botella, L.; Lygis, V.; Rigling, D., 2017: Population genetic analysis of a parasitic mycovirus to infer the invasion history of its fungal host. Molecular Ecology, 26, 9: 2482-2497. doi: 10.1111/mec.14048

Rellstab, C.; Fischer, M.C.; Zoller, S.; Graf, R.; Tedder, A.; Shimizu, K.K.; Widmer, A.; Holderegger, R.; Gugerli, F., 2017: Local adaptation (mostly) remains local: reassessing environmental associations of climate-related candidate SNPs in Arabidopsis halleri. Heredity, 118, 2: 193-201. doi: 10.1038/hdy.2016.82

Gugerli, F.; Vaupel, A.; Ellenbroek, T.; Nagel, D.; Muller, R.; Luqman, H.; Brodbeck, S.; Bolliger, J., 2017: Amphibien und Autobahnen: eine Trennungsgeschichte? Autoroutes: quels véritables effets sur les amphibiens?. Nature et Paysage. Natur und Landschaft: Inside, 26-30.

Souza, R.C.; Solly, E.F.; Dawes, M.A.; Graf, F.; Hagedorn, F.; Egli, S.; Clement, C.R.; Nagy, L.; Rixen, C.; Peter, M., 2017: Responses of soil extracellular enzyme activities to experimental warming and CO2 enrichment at the alpine treeline. Plant and Soil, 416, 1-2: 527-537. doi: 10.1007/s11104-017-3235-8

Solly, E.F.; Lindahl, B.D.; Dawes, M.A.; Peter, M.; Souza, R.; Rixen, C.; Hagedorn, F., 2017: Experimental soil warming shifts the fungal community composition at the alpine treeline. New Phytologist, 215, 2: 766-778. doi: 10.1111/nph.14603

Milanesi, P.; Holderegger, R.; Bollmann, K.; Gugerli, F.; Zellweger, F., 2017: Three-dimensional habitat structure and landscape genetics: a step forward in estimating functional connectivity. Ecology, 98, 2: 393-402. doi: 10.1002/ecy.1645

Fischer, M.C.; Rellstab, C.; Leuzinger, M.; Roumet, M.; Gugerli, F.; Shimizu, K.K.; Holderegger, R.; Widmer, A., 2017: Estimating genomic diversity and population differentiation – an empirical comparison of microsatellite and SNP variation in Arabidopsis halleri. BMC Genomics, 18: 69 (15 pp.). doi: 10.1186/s12864-016-3459-7

Trapiello, E.; Schoebel, C.N.; Rigling, D., 2017: Fungal community in symptomatic ash leaves in Spain. Baltic Forestry, 23, 1: 68-73.

Trapiello Vázquez, E.; Shoebel, C.N.; Rigling, D., 2017: Diversidad de hongos en fresno común (Fraxinus excelsior) y presencia de patógenos de esta especie forestal. Revista Montes, 130: 22-25.

Rigling, D.; Prospero, S.; Hölling, D.; Schöbel, C.; Cornejo, C.; Schneider, S.; Meier, F.; Dubach, V.; Queloz, V., 2017: Überwachung von besonders gefährlichen Schadorganismen für den Wald – Jahresbericht 2016. 53 p.

Buser, C., 2017: Phytophthora im Wald. Landwirt: die Fachzeitschrift für die bäuerliche Familie, 74-76.

Thiel-Egenter, C., 2017: Naturschutzgenetik aus Ökobürosicht – Chancen und Erfahrungen. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 71-76.

Schmidt, B.R.; Grünig, C.R., 2017: Einsatz von eDNA im Amphibien-Monitoring. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 57-62.

Rellstab, C.; Fischer, M.C.; Csencsics, D.; Gugerli, F.; Holderegger, R., 2017: Bedeutung der lokalen Anpassung in der Naturschutzgenetik. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 31-37.

Meier, R.; Stapfer, A., 2017: Werkzeugkasten für genetische Methoden in der Biodiversitätsförderung. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 49-56.

Holderegger, R., 2017: Genetik im Naturschutz: eine Übersicht. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 7-13.

Hartmann, M.; Sperisen, C., 2017: Der Boden – eine wertvolle Ressource für die genetische Vielfalt. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 39-47.

Cordillot, F., 2017: Bedeutung der Naturschutzgenetik für den Bund. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 63-69.

Bühler, C.; Dubey, S., 2017: Application de la génétique de la conservation dans les bureaux d’études en écologie. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 77-82.

Bolliger, J.; Gugerli, F., 2017: Isoliert oder vernetzt? Auswirkungen der Landschaft auf den Genfluss. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 23-29.

Biebach, I.; Keller, L., 2017: Inzucht und ihre Bedeutung für den Naturschutz. In: Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. 15-22.

Csencsics, D.; Gugerli, F. (eds), 2017: Naturschutzgenetik. Forum für Wissen 2017, WSL Birmensdorf. WSL Berichte, 60. WSL Birmensdorf, Eidg. Forschungsanstalt für Wald, Schnee und Landschaft. 82 p.

Moser, B.; Büntgen, U.; Molinier, V.; Peter, M.; Sproll, L.; Stobbe, U.; Tegel, W.; Egli, S., 2017: Ecological indicators of Tuber aestivum habitats in temperate European beech forests. Fungal Ecology, 29: 59-66. doi: 10.1016/j.funeco.2017.06.002

Büntgen, U.; Bagi, I.; Fekete, O.; Molinier, V.; Peter, M.; Splivallo, R.; Vahdatzadeh, M.; Richard, F.; Murat, C.; Tegel, W.; Stobbe, U.; Martínez-Peña, F.; Sproll, L.; Hülsmann, L.; Nievergelt, D.; Meier, S.; Egli, S., 2017: New Insights into the complex relationship between weight and maturity of Burgundy Truffles (Tuber aestivum). PLoS One, 12, 1: e0170375 (15 pp.). doi: 10.1371/journal.pone.0170375

Lygis, V.; Prospero, S.; Burokiene, D.; Schoebel, C.N.; Marciulyniene, D.; Norkute, G.; Rigling, D., 2017: Virulence of the invasive ash pathogen Hymenoscyphus fraxineus in old and recently established populations. Plant Pathology, 66, 5: 783-791. doi: 10.1111/ppa.12635

Queloz, V.; Hopf, S.; Schoebel, C.N.; Rigling, D.; Gross, A., 2017: Ash dieback in Switzerland: history and scientific achievements. In: Vasaitis, R.; Enderle, R. (eds), 2017: Dieback of european ash (Fraxinus spp.) - consequences and guidelines for sustainable management. Uppsala, SLU. 68-78.

Schmid, M.; Csencsics, D.; Gugerli, F., 2016: Repetitive flanking sequences challenge microsatellite marker development: a case study in the lepidopteran Melanargia galathea. Molecular Ecology Resources, 16, 6: 1499-1507. doi: 10.1111/1755-0998.12547

Rellstab, C.; Zoller, S.; Walthert, L.; Lesur, I.; Pluess, A.R.; Graf, R.; Bodénès, C.; Sperisen, C.; Kremer, A.; Gugerli, F., 2016: Signatures of local adaptation in candidate genes of oaks (Quercus spp.) with respect to present and future climatic conditions. Molecular Ecology, 25, 23: 5907-5924. doi: 10.1111/mec.13889

Blaser, S.; Peter, M.; Senn-Irlet, B., 2016: Pilzmonitoring in Naturwaldreservaten. Étudier les réserves forestières naturelles grâce aux champignons. Nature et Paysage. Natur und Landschaft: Inside, 12.

Holderegger, R.; Gugerli, F.; Bolliger, J., 2016: Naturschutzgenetik für die Praxis. Génétique de la conservation pour la pratique. Nature et Paysage. Natur und Landschaft: Inside, 19.

Gugerli, F.; Holderegger, R., 2016: Genetische Methoden. In: Holderegger, R.; Segelbacher, G. (eds), 2016: Naturschutzgenetik: Ein Handbuch für die Praxis. Bern, Haupt. 183-202.

Mosca, E.; Gugerli, F.; Eckert, A.J.; Neale, D.B., 2016: Signatures of natural selection on Pinus cembra and P. mugo along elevational gradients in the Alps. Tree Genetics and Genomes, 12, 1: 9 (15 pp.). doi: 10.1007/s11295-015-0964-9

Molinier, V.; Murat, C.; Baltensweiler, A.; Büntgen, U.; Martin, F.; Meier, B.; Moser, B.; Sproll, L.; Stobbe, U.; Tegel, W.; Egli, S.; Peter, M., 2016: Fine-scale genetic structure of natural Tuber aestivum sites in southern Germany. Mycorrhiza, 26, 8: 895-907. doi: 10.1007/s00572-016-0719-y

Molinier, V.; Murat, C.; Peter, M.; Gollotte, A.; De la Varga, H.; Meier, B.; Egli, S.; Belfiori, B.; Paolocci, F.; Wipf, D., 2016: SSR-based identification of genetic groups within European populations of Tuber aestivum Vittad. Mycorrhiza, 26, 2: 99-110. doi: 10.1007/s00572-015-0649-0

Rellstab, C.; Bühler, A.; Graf, R.; Folly, C.; Gugerli, F., 2016: Using joint multivariate analyses of leaf morphology and molecular-genetic markers for taxon identification in three hybridizing European white oak species (Quercus spp.). Annals of Forest Science, 73, 3: 669-679. doi: 10.1007/s13595-016-0552-7

Gugerli, F., 2016: Waldbiodiversität auf genetischer Ebene. La biodiversité forestière à l'échelle génétique. Schweizerische Zeitschrift für Forstwesen, 167, 6: 307 (1 p.).

Gugerli, F.; Balkenhol, N.; Bolliger, J., 2016: Genfluss und Lebensraumzerschneidung. In: Holderegger, R.; Segelbacher, G. (eds), 2016: Naturschutzgenetik. Ein Handbuch für die Praxis. Bern, Haupt. 107-128.

Hagedorn, F.; Joseph, J.; Peter, M.; Luster, J.; Pritsch, K.; Geppert, U.; Kerner, R.; Molinier, V.; Egli, S.; Schaub, M.; Liu, J.; Li, M.; Sever, K.; Weiler, M.; Siegwolf, R.T.W.; Gessler, A.; Arend, M., 2016: Recovery of trees from drought depends on belowground sink control. Nature Plants, 2, 8: 16111 (5 pp.). doi: 10.1038/NPLANTS.2016.111

Senn-Irlet, B.; Peter, M., 2016: Sclerotinia cirsii-spinosissimi, a new species from the Alps. Ascomycete.org, 8, 5: 235-240. doi: 10.25664/art-0191

Schöbel, C., 2016: Das Eschentriebsterben. g'plus: Magazin für die grüne Branche, 118, 7: 34-35.

Rellstab, C.; Pluess, A.R.; Gugerli, F., 2016: Lokale Anpassung bei Waldbaumarten: genetische Prozesse und Bedeutung im Klimawandel. Schweizerische Zeitschrift für Forstwesen, 167, 6: 333-340. doi: 10.3188/szf.2016.0333

Peter, M.; Kohler, A.; Ohm, R.A.; Kuo, A.; Krützmann, J.; Morin, E.; Arend, M.; Barry, K.W.; Binder, M.; Choi, C.; Clum, A.; Copeland, A.; Grisel, N.; Haridas, S.; Kipfer, T.; LaButti, K.; Lindquist, E.; Lipzen, A.; Maire, R.; ... Martin, F.M., 2016: Ectomycorrhizal ecology is imprinted in the genome of the dominant symbiotic fungus Cenococcum geophilum. Nature Communications, 7: 12662 (15 pp.). doi: 10.1038/ncomms12662

Frei, M.; Csencsics, D.; Brodbeck, S.; Schweizer, E.; Bühler, C.; Gugerli, F.; Bolliger, J., 2016: Combining landscape genetics, radio-tracking and long-term monitoring to derive management implications for Natterjack toads (Epidalea calamita) in agricultural landscapes. Journal for Nature Conservation, 32: 22-34. doi: 10.1016/j.jnc.2016.04.002

Babst-Kostecka, A.A.; Waldmann, P.; Frérot, H.; Vollenweider, P., 2016: Plant adaptation to metal polluted environments – physiological, morphological, and evolutionary insights from Biscutella laevigata. Environmental and Experimental Botany, 127: 1-13. doi: 10.1016/j.envexpbot.2016.03.001

Burkart, S.; Gugerli, F.; Senn, J.; Kuehn, R.; Bolliger, J., 2016: Evaluating the functionality of expert-assessed wildlife corridors with genetic data from roe deer. Basic and Applied Ecology, 17, 1: 52-60. doi: 10.1016/j.baae.2015.09.001

Gugerli, F.; Hayes, S., 2016: EVOLTREE training activities. In: Kremer, A.; Hayes, S.; González-Martínez, S.C. (eds), 2016: Evolution of trees and forest communities: ten years of the EVOLTREE network. Bordeaux, PG Edition. 20-22.

Lefèvre, F.; Pichot, C.; Beuker, E.; Kowalczyk, J.; Matras, J.; Ziehe, M.; Villar, M.; Peter, M.; Gugerli, F.; Orazio, C.; Cordero, R.; Alia, R.; Van Halder, I.; González-Martínez, S.C.; Kremer, A., 2016: Intensive study sites. In: Kremer, A.; Hayes, S.; González-Martínez, S.C. (eds), 2016: 6-9.

Sperisen, C.; Pluess, A.R.; Arend, M.; Brang, P.; Gugerli, F.; Heiri, C., 2016: Erhaltung genetischer Ressourcen im Schweizer Wald - heutige Situation und Handlungsbedarf angesichts des Klimawandels. In: Pluess, A.R.; Augustin, S.; Brang, P.; Bundesamt für Umwelt BAFU,Bern; Eidgenössische Forschungsanstalt für Wald,Schnee und Landschaft WSL,Birmensdorf (eds), 2016: Wald im Klimawandel. Grundlagen für Adaptationsstrategien. Bern, Stuttgart, Wien, Haupt. 367-383.

Sperisen, C.; Pluess, A.R.; Arend, M.; Brang, P.; Gugerli, F.; Heiri, C., 2016: Conservation des ressources génétiques dans la forêt suisse - situation actuelle et nécessité d'agir face aux changements climatiques. In: Pluess, A.R.; Augustin, S.; Brang, P.; Office fédéral de l’environnement OFEV,Berne; Institut fédéral de recherches sur la forêt (eds), 2016: Forêts et changements climatiques. Éléments pour des stratégies d'adaptation. Berne, Stuttgart, Vienne, Haupt. 371-389.

Gugerli, F.; Frank, A.; Rellstab, C.; Pluess, A.R.; Moser, B.; Arend, M.; Sperisen, C.; Wohlgemuth, T.; Heiri, C., 2016: Variation génétique et adaptation locale des essences forestières sous le signe des changements climatiques. In: Pluess, A.R.; Augustin, S.; Brang, P.; Office fédéral de l’environnement OFEV,Berne; Institut fédéral de recherches sur la forêt, l.n.e.l.p.W.; Birmensdorf (eds), 2016: Forêts et changements climatiques. Éléments pour des stratégies d'adaptation. Berne, Stuttgart, Vienne, Haupt. 97-117.

Gugerli, F.; Frank, A.; Rellstab, C.; Pluess, A.R.; Moser, B.; Arend, M.; Sperisen, C.; Wohlgemuth, T.; Heiri, C., 2016: Genetische Variation und lokale Anpassung bei Waldbaumarten im Zeichen des Klimawandels. In: Pluess, A.R.; Augustin, S.; Brang, P.; Bundesamt für Umwelt BAFU,Bern; Eidgenössische Forschungsanstalt für Wald,Schnee und Landschaft WSL,Birmensdorf (eds), 2016: Wald im Klimawandel. Grundlagen für Adaptationsstrategien. Bern, Stuttgart, Wien, Haupt. 93-113.

Molinier, V.; Peter, M.; Stobbe, U.; Egli, S., 2016: The Burgundy truffle (Tuber aestivum syn. uncinatum): A truffle species with a wide habitat range over Europe. In: Zambonelli, A.; Iotti, M.; Murat, C. (eds), 2016: True truffle (Tuber spp.) in the World. Soil ecology, systematics and biochemistry. Cham, Springer. 33-47. doi: 10.1007/978-3-319-31436-5_3

Rigling, D.; Hilfiker, S.; Schöbel, C.; Meier, F.; Engesser, R.; Scheidegger, C.; Stofer, S.; Senn-Irlet, B.; Queloz, V., 2016: Le dépérissement des pousses du frêne. Biologie, symptômes et recommandations pour la gestion. Notice pour le praticien, 57. Birmensdorf, Institut fédéral de recherches WSL. 8 p.

Rigling, D.; Hilfiker, S.; Schöbel, C.; Meier, F.; Engesser, R.; Scheidegger, C.; Stofer, S.; Senn-Irlet, B.; Queloz, V., 2016: Das Eschentriebsterben. Biologie, Krankheitssymptome und Handlungsempfehlungen. Merkblatt für die Praxis, 57. Birmensdorf, Eidg. Forschungsanstalt WSL. 8 p.

Stockenhuber, R.; Zoller, S.; Shimizu-Inatsugi, R.; Gugerli, F.; Shimizu, K.K.; Widmer, A.; Fischer, M.C., 2015: Efficient detection of novel nuclear markers for Brassicaceae by transcriptome sequencing. PLoS One, 10, 6: e0128181 (19 pp.). doi: 10.1371/journal.pone.0128181

Neuschulz, E.L.; Mueller, T.; Bollmann, K.; Gugerli, F.; Böhning-Gaese, K., 2015: Seed perishability determines the caching behaviour of a food-hoarding bird. Journal of Animal Ecology, 84, 1: 71-78. doi: 10.1111/1365-2656.12283

Kohler, A.; Kuo, A.; Nagy, L.G.; Morin, E.; Barry, K.W.; Buscot, F.; Canbäck, B.; Choi, C.; Cichocki, N.; Clum, A.; Peter, M.; Mycorrhizal Genomics Initiative Consortium; Martin, F., 2015: Convergent losses of decay mechanisms and rapid turnover of symbiosis genes in mycorrhizal mutualists. Nature Genetics, 47, 4: 410-415. doi: 10.1038/ng.3223

Holderegger, R.; Bolliger, M.; Gugerli, F., 2015: Jusqu'où les grains de pollen s'envolent-ils?. La Forêt, 68, 2: 17-19.

Schmid, M.; Birrer, S.; Bolliger, J.; Csencsics, D.; Gugerli, F., 2015: Monitoring genetischer Vielfalt: Fallbeispiel Schachbrettfalter. Suivi de la diversité génétique: exemple du Demi-deuil. Nature et Paysage. Natur und Landschaft: Inside, 19-24.

Bolliger, J.; Junge, X.; Wülser, G.; Pohl, C.; Vaupel, A.; Gugerli, F.; Teilnehmende der GeneMig-Workshops, 2015: Herausforderungen und Chancen in der Zusammenarbeit Praxis-Wissenschaft – ein Erfahrungsbericht. Défis et opportunités de la collaboration entre science et pratique: compte rendu d'expérience. Nature et Paysage. Natur und Landschaft: Inside, 24-28.

Seppälä, O.; Louhic, K.; Karvonen, A.; Rellstab, C.; Jokela, J., 2015: Relative reproductive success of co-infecting parasite genotypes under intensified within-host competition. Infection, Genetics and Evolution, 36: 450-455. doi: 10.1016/j.meegid.2015.08.015

Rellstab, C.; Gugerli, F.; Eckert, A.J.; Hancock, A.M.; Holderegger, R., 2015: A practical guide to environmental association analysis in landscape genomics. Molecular Ecology, 24, 17: 4348-4370. doi: 10.1111/mec.13322

Gugerli, F.; Holderegger, R.; Bolliger, M., 2015: Genetic resources. In: Rigling, A.; Schaffer, H.P. (eds), 2015: Forest report 2015. Condition and use of Swiss forests. Bern; Birmensdorf, Federal Office for the Environment FOEN; Swiss Federal Institute for Forest, Snow and Landscape Reseach WSL. 82-83.

Gugerli, F.; Holderegger, R.; Bolliger, M., 2015: Ressources génétiques. In: Rigling, A.; Schaffer, H.P. (eds), 2015: Rapport forestier 2015. État et utilisation de la forêt suisse. Berne; Birmensdorf, Office fédéral de l'environnement OFEV; institut fédéral de recherches sur la forêt, la neige et le paysage WSL. 82-83.

Gugerli, F.; Holderegger, R.; Bolliger, M., 2015: Risorse genetiche. In: Rigling, A.; Schaffer, H.P. (eds), 2015: Rapporto forestale 2015. Stato e utilizzazione del bosco svizzero. Berna; Birmensdorf, Ufficio federale dell'ambiente UFAM; istituto federale di ricerca per la foresta, la neve e il paesaggio WSL. 82-83.

Gugerli, F.; Holderegger, R.; Bolliger, M., 2015: Genetische Ressourcen. In: Rigling, A.; Schaffer, H.P. (eds), 2015: Waldbericht 2015. Zustand und Nutzung des Schweizer Waldes. Bern; Birmensdorf, Bundesamt für Umwelt BAFU; Eidg. Forschungsanstalt für Wald, Schnee und Landschaft WSL. 82-83.

Holderegger, R.; Bolliger, M.; Gugerli, F., 2015: Wie weit fliegen Pollenkörner?. Wald und Holz, 31-33.

Burokiene, D.; Prospero, S.; Jung, E.; Marciulyniene, D.; Moosbrugger, K.; Norkute, G.; Rigling, D.; Lygis, V.; Schoebel, C.N., 2015: Genetic population structure of the invasive ash dieback pathogen Hymenoscyphus fraxineus in its expanding range. Biological Invasions, 17, 9: 2743-2756. doi: 10.1007/s10530-015-0911-6

DiLeo, M.F.; Graf, R.; Holderegger, R.; Rico, Y.; Wagner, H.H., 2015: Highly polymorphic microsatellite markers in Pulsatilla vulgaris (Ranunculaceae) using next-generation sequencing. Applications in Plant Sciences, 3, 7: 1500031 (3 pp.). doi: 10.3732/apps.1500031

Bonfils, P.; Rigling, A.; Brändli, U.; Brang, P.; Forster, B.; Engesser, R.; Gugerli, F.; Junod, P.; Müller, R.; Günthardt-Goerg, M., 2015: Le chêne face aux changements climatiques. Perspectives d'avenir d'une essence. Notice pour le praticien, 55. Birmensdorf, Institut fédéral de recherches WSL. 12 p.

Bonfils, P.; Rigling, A.; Brändli, U.; Brang, P.; Forster, B.; Engesser, R.; Gugerli, F.; Junod, P.; Müller, R.; Günthardt-Goerg, M., 2015: Die Eiche im Klimawandel. Zukunftschancen einer Baumart. Merkblatt für die Praxis, 55. Birmensdorf, Eidg. Forschungsanstalt WSL. 12 p.

Frei, M.; Csencsics, D.; Bühler, C.; Gugerli, F.; Bolliger, J., 2014: Wie gut sind Vorkommen der Kreuzkröte in einer landwirtschaftlich geprägten Landschaft vernetzt? – Interconnexion des populations de crapauds calamites dans le paysage agricole. Nature et Paysage. Natur und Landschaft: Inside, 16-20.

Buehler, D.; Holderegger, R.; Brodbeck, S.; Schnyder, E.; Gugerli, F., 2014: Validation of outlier loci through replication in independent data sets: a test on Arabis alpina. Ecology and Evolution, 4, 22: 4296-4306. doi: 10.1002/ece3.1300

Schoebel, C.N.; Zoller, S.; Rigling, D., 2014: Detection and genetic characterisation of a novel mycovirus in Hymenoscyphus fraxineus, the causal agent of ash dieback. Infection, Genetics and Evolution, 28: 78-86. doi: 10.1016/j.meegid.2014.09.001

Babst-Kostecka, A.A.; Parisod, C.; Godé, C.; Vollenweider, P.; Pauwels, M., 2014: Patterns of genetic divergence among populations of the pseudometallophyte Biscutella laevigata from southern Poland. Plant and Soil, 383, 1-2: 245-256. doi: 10.1007/s11104-014-2171-0

Lendvay, B.; Höhn, M.; Brodbeck, S.; Mîndrescu, M.; Gugerli, F., 2014: Genetic structure in Pinus cembra from the Carpathian Mountains inferred from nuclear and chloroplast microsatellites confirms post-glacial range contraction and identifies introduced individuals. Tree Genetics and Genomes, 10, 5: 1419-1433. doi: 10.1007/s11295-014-0770-9

Schoebel, C.N.; Auld, S.K.J.R.; Spaak, P.; Little, T.J., 2014: Effects of juvenile host density and food availability on adult immune response, parasite resistance and virulence in a Daphnia-parasite system. PLoS One, 9, 4: e94569 (9 pp.). doi: 10.1371/journal.pone.0094569

Gerber, S.; Chadœuf, J.; Gugerli, F.; Lascoux, M.; Buiteveld, J.; Cottrell, J.; Dounavi, A.; Fineschi, S.; Forrest, L.L.; Fogelqvist, J.; Goicoechea, P.G.; Svejgaard Jensen, J.; Salvini, D.; Vendramin, G.G.; Kremer, A., 2014: High rates of gene flow by pollen and seed in oak populations across Europe. PLoS One, 9, 1: e85130 (16 pp.). doi: 10.1371/journal.pone.0085130

Schoebel, C.N.; Stewart, J.; Gruenwald, N.J.; Rigling, D.; Prospero, S., 2014: Population history and pathways of spread of the plant pathogen Phytophthora plurivora. PLoS One, 9, 1: e85368 (11 pp.). doi: 10.1371/journal.pone.0085368

Zulliger, D.; Schnyder, E.; Gugerli, F., 2013: Are adaptive loci transferable across genomes of related species? Outlier and environmental association analyses in Alpine Brassicaceae species. Molecular Ecology, 22, 6: 1626-1639. doi: 10.1111/mec.12199

Winkler, M.; Tribsch, A.; Schneeweiss, G.M.; Brodbeck, S.; Gugerli, F.; Holderegger, R.; Schönswetter, P., 2013: Strong nuclear differentiation contrasts with widespread sharing of plastid DNA haplotypes across taxa in European purple saxifrages (Saxifraga section Porphyrion subsection Oppositifoliae). Botanical Journal of the Linnean Society, 173, 4: 622-636. doi: 10.1111/boj.12104

Schoebel, C.N.; Brodbeck, S.; Buehler, D.; Cornejo, C.; Gajurel, J.; Hartikainen, H.; Keller, D.; Leys, M.; Říčanová, Š.; Segelbacher, G.; Werth, S.; Csencsics, D., 2013: Lessons learned from microsatellite development for nonmodel organisms using 454 pyrosequencing. Journal of Evolutionary Biology, 26, 3: 600-611. doi: 10.1111/jeb.12077

Louhi, K.; Karvonen, A.; Rellstab, C.; Jokela, J., 2013: Genotypic and phenotypic variation in transmission traits of a complex life cycle parasite. Ecology and Evolution, 3, 7: 2116-2127. doi: 10.1002/ece3.621

Brodbeck, S.; Cioldi, F.; Gugerli, F., 2013: Recherche génétique de traces dans l'arolière. La Forêt, 15-19.

Bolliger, J.; Junge, X.; Vaupel, A.; Gugerli, F., 2013: Wissenschaft und Praxis im Dialog über Landschaftsgenetik. Science et pratique dans la génétique du paysage. Nature et Paysage. Natur und Landschaft: Inside, 16-19.

Steinbrecher, R.; Contran, N.; Gugerli, F.; Schnitzler, J.-P.; Zimmer, I.; Menard, T.; Günthardt-Goerg, M.S., 2013: Inter- and intra-specific variability in isoprene production and photosynthesis of Central European oak species. Plant Biology, 15, Suppl. 1: 148-156. doi: 10.1111/j.1438-8677.2012.00688.x

Herzog, C.; Peter, M.; Pritsch, K.; Günthardt-Goerg, M.S.; Egli, S., 2013: Drought and air warming affects abundance and exoenzyme profiles of Cenococcum geophilum associated with Quercus robur, Q. petraea and Q. pubescens. Plant Biology, 15, Suppl. 1: 230-237. doi: 10.1111/j.1438-8677.2012.00614.x

Uroz, S.; Courty, P.E.; Pierrat, J.C.; Peter, M.; Buée, M.; Turpault, M.P.; Garbaye, J.; Frey-Klett, P., 2013: Functional profiling and distribution of the forest soil bacterial communities along the soil mycorrhizosphere continuum. Microbial Ecology, 66, 2: 404-415. doi: 10.1007/s00248-013-0199-y

Rellstab, C.; Zoller, S.; Tedder, A.; Gugerli, F.; Fischer, M.C., 2013: Validation of SNP allele frequencies determined by pooled next-generation sequencing in natural populations of a non-model plant species. PLoS One, 8, 11: e80422 (10 pp.). doi: 10.1371/journal.pone.0080422

Rellstab, C.; Karvonen, A.; Louhi, K.; Jokela, J., 2013: Genotype-specific vs. cross-reactive host immunity against a macroparasite. PLoS One, 8, 10: e78427 (8 pp.). doi: 10.1371/journal.pone.0078427

Louhi, K.; Karvonen, A.; Rellstab, C.; Louhi, R.; Jokela, J., 2013: Prevalence of infection as a predictor of multiple genotype infection frequency in parasites with multiple-host life cycle. Journal of Animal Ecology, 82, 1: 191-200. doi: 10.1111/j.1365-2656.2012.02028.x

King, G.M.; Gugerli, F.; Fonti, P.; Frank, D.C., 2013: Tree growth response along an elevational gradient: climate or genetics?. Oecologia, 173, 4: 1587-1600. doi: 10.1007/s00442-013-2696-6

Karvonen, A.; Kristjánsson, B.K.; Skúlason, S.; Lanki, M.; Rellstab, C.; Jokela, J., 2013: Water temperature, not fish morph, determines parasite infections of sympatric Icelandic threespine sticklebacks (Gasterosteus aculeatus). Ecology and Evolution, 3, 6: 1507-1517. doi: 10.1002/ece3.568

Gugerli, F.; Alvarez, N.; Tinner, W., 2013: A deep dig - hindsight on Holocene vegetation composition from ancient environmental DNA. Molecular Ecology, 22, 13: 3433-3436. doi: 10.1111/mec.12356

Fischer, M.C.; Rellstab, C.; Tedder, A.; Zoller, S.; Gugerli, F.; Shimizu, K.K.; Holderegger, R.; Widmer, A., 2013: Population genomic footprints of selection and associations with climate in natural populations of Arabidopsis halleri from the Alps. Molecular Ecology, 22, 22: 5594-5607. doi: 10.1111/mec.12521

Gugerli, F.; Zimmermann, N.E.; Holderegger, R., 2013: Genetische Vielfalt. Die Alpen als Barriere und Schmelztiegel. Hotspot, 12-13.

Büntgen, U.; Peter, M.; Kauserud, H.; Egli, S., 2013: Unraveling environmental drivers of a recent increase in Swiss fungi fruiting. Global Change Biology, 19, 9: 2785-2794. doi: 10.1111/gcb.12263

Stobbe, U.; Stobbe, A.; Sproll, L.; Tegel, W.; Peter, M.; Büntgen, U.; Egli, S., 2013: New evidence for the symbiosis between Tuber aestivum and Picea abies. Mycorrhiza, 23, 8: 669-673. doi: 10.1007/s00572-013-0508-9

Stobbe, U.; Egli, S.; Tegel, W.; Peter, M.; Sproll, L.; Büntgen, U., 2013: Potential and limitations of Burgundy truffle cultivation. Applied Microbiology and Biotechnology, 97, 12: 5215-5224. doi: 10.1007/s00253-013-4956-0

Gugerli, F.; Brandl, R.; Castagneyrol, B.; Franc, A.; Jactel, H.; Koelewijn, H.; Martin, F.; Peter, M.; Pritsch, K.; Schröder, H.; Smulders, M.J.M.; Kremer, A.; Ziegenhagen, B.; Evoltree JERA3 contributors, 2013: Community genetics in the time of next-generation molecular technologies. Molecular Ecology, 22, 12: 3198-3207. doi: 10.1111/mec.12300

Buehler, D.; Poncet, B.N.; Holderegger, R.; Manel, S.; Taberlet, P.; Gugerli, F., 2013: An outlier locus relevant in habitat-mediated selection in an alpine plant across independent regional replicates. Evolutionary Ecology, 27, 2: 285-300. doi: 10.1007/s10682-012-9597-8

Peter, M.; Buée, M.; Egli, S., 2013: Biodiversity of mycorrhizal fungi as a crucial player in forest ecosystem functioning. In: Kraus, D.; Krumm, F. (eds), 2013: Integrative approaches as an opportunity for the conservation of forest biodiversity. Joensuu, European Forest Institute. 170-179.

Seppälä, O.; Karvonen, A.; Rellstab, C.; Louhi, K.; Jokela, J., 2012: Reciprocal interaction matrix reveals complex genetic and dose-dependent specificity among coinfecting parasites. American Naturalist, 180, 3: 306-315. doi: 10.1086/666985

Brodbeck, S.; Cioldi, F.; Gugerli, F., 2012: Genetische Spurensuche im Arvenwald. Wald und Holz, 93, 5: 31-34.

Taberlet, P.; Zimmermann, N.E.; Englisch, T.; Tribsch, A.; Holderegger, R.; Alvarez, N.; Niklfeld, H.; Coldea, G.; Mirek, Z.; Moilanen, A.; Steinmann, K.; Thiel-Egenter, C.; Wohlgemuth, T.; Gugerli, F.; IntraBioDiv Consortium, 2012: Genetic diversity in widespread species is not congruent with species richness in alpine plant communities. Ecology Letters, 15, 12: 1439-1448. doi: 10.1111/ele.12004

Peintinger, M.; Arrigo, N.; Brodbeck, S.; Koller, A.; Imsand, M.; Holderegger, R., 2012: Genetic differentiation of the endemic grass species Deschampsia littoralis at pre-Alpine lakes. Alpine Botany, 122, 2: 87-93. doi: 10.1007/s00035-012-0107-y

Manel, S.; Gugerli, F.; Thuiller, W.; Alvarez, N.; Legendre, P.; Holderegger, R.; Gielly, L.; Taberlet, P.; IntraBioDiv Consortium, 2012: Broad-scale adaptive genetic variation in alpine plants is driven by temperature and precipitation. Molecular Ecology, 21, 15: 3729-3738. doi: 10.1111/j.1365-294X.2012.05656.x

Büntgen, U.; Egli, S.; Tegel, W.; Stobbe, U.; Sproll, L.; Elburg, R.; Peter, M.; Nievergelt, D.; Cherubini, P.; Stenseth, N.C., 2012: Illuminating the mysterious world of truffles. Frontiers in Ecology and the Environment, 10, 9: 462-463. doi: 10.1890/12.Wb.021

Hepenstrick, D.; Thiel, D.; Holderegger, R.; Gugerli, F., 2012: Genetic discontinuities in roe deer (Capreolus capreolus) coincide with fenced transportation infrastructure. Basic and Applied Ecology, 13, 7: 631-638. doi: 10.1016/j.baae.2012.08.009

Holderegger, R.; Gugerli, F., 2012: Where do you come from, where do you go? Directional migration rates in landscape genetics. Molecular Ecology, 21, 23: 5640-5642. doi: 10.1111/mec.12032

Landergott, U.; Gugerli, F.; Hoebee, S.E.; Finkeldey, R.; Holderegger, R., 2012: Effects of seed mass on seedling height and competition in European white oaks. Flora, 207, 10: 721-725. doi: 10.1016/j.flora.2012.09.001

Winkler, M.; Tribsch, A.; Schneeweiss, G.M.; Brodbeck, S.; Gugerli, F.; Holderegger, R.; Abbotts, R.J.; Schönswetter, P., 2012: Tales of the unexpected: phylogeography of the arctic-alpine model plant Saxifraga oppositifolia (Saxifragaceae) revisited. Molecular Ecology, 21, 18: 4618-4630. doi: 10.1111/j.1365-294X.2012.05705.x

Kerner, R.; Delgado-Eckert, E.; Del Castillo, E.; Müller-Starck, G.; Peter, M.; Kuster, B.; Tisserant, E.; Pritsch, K., 2012: Comprehensive proteome analysis in Cenococcum geophilum Fr. as a tool to discover drought-related proteins. Journal of Proteomics, 75, 12: 3707-3719. doi: 10.1016/j.jprot.2012.04.039

Kormann, U.; Gugerli, F.; Ray, N.; Excoffier, L.; Bollmann, K., 2012: Parsimony-based pedigree analysis and individual-based landscape genetics suggest topography to restrict dispersal and connectivity in the endangered capercaillie. Biological Conservation, 152: 241-252. doi: 10.1016/j.biocon.2012.04.011

Kamm, U.; Gugerli, F.; Rotach, P.; Edwards, P.; Holderegger, R., 2012: Seltenes und zerstreutes Vorkommen: Auswirkungen auf den Paarungserfolg des Speierlings. Schweizerische Zeitschrift für Forstwesen, 163, 4: 130-136. doi: 10.3188/szf.2012/0130

Buehler, D.; Graf, R.; Holderegger, R.; Gugerli, F., 2012: Contemporary gene flow and mating system of Arabis alpina in a Central European alpine landscape. Annals of Botany, 109, 7: 1359-1367. doi: 10.1093/aob/mcs066

Aavik, T.; Edwards, P.J.; Holderegger, R.; Graf, R.; Billeter, R., 2012: Genetic consequences of using seed mixtures in restoration: a case study of a wetland plant Lychnis flos-cuculi. Biological Conservation, 145, 1: 195-204. doi: 10.1016/j.biocon.2011.11.004

Barthe, S.; Gugerli, F.; Barkley, N.A.; Maggia, L.; Cardi, C.; Scotti, I., 2012: Always look on both sides: phylogenetic information conveyed by simple sequence repeat allele sequences. PLoS One, 7, 7: e40699 (9 pp.). doi: 10.1371/journal.pone.0040699

Waser, N.M.; Wirth, L.R.; Graf, R.; Gugerli, F.; Landergott, U.; Erhardt, A.; Linder, H.P.; Holderegger, R., 2011: Effects of floral neighborhood on seed set and degree of outbreeding in a high-alpine cushion plant. Oecologia, 167, 2: 427-434. doi: 10.1007/s00442-011-1985-1

Buehler, D.; Graf, R.; Holderegger, R.; Gugerli, F., 2011: Using the 454 pyrosequencing-based technique in the development of nuclear microsatellite loci in the alpine plant Arabis alpina (Brassicaceae). American Journal of Botany, 98, 5: e103-e105. doi: 10.3732/ajb.1000488

Keller, D.; Brodbeck, S.; Flöss, I.; Vonwil, G.; Holderegger, R., 2011: Ausbreitung und Besiedlungsgeschichte der Zierlichen Moosjungfer Leucorrhinia caudalis in der Schweiz (Odonata: Libellulidae). Entomo Helvetica, 4: 139-152.

Pritsch, K.; Courty, P.E.; Churin, J.; Cloutier-Hurteau, B.; Ali, M.A.; Damon, C.; Duchemin, M.; Egli, S.; Ernst, J.; Fraissinet-Tachet, L.; Kuhar, F.; Legname, E.; Marmeisse, R.; Müller, A.; Nikolova, P.; Peter, M.; Plassard, C.; Richard, F.; Schloter, M.; ... Garbaye, J., 2011: Optimized assay and storage conditions for enzyme activity profiling of ectomycorrhizae. Mycorrhiza, 21, 7: 589-600. doi: 10.1007/s00572-011-0364-4

Kremer, A.; Vinceti, B.; Alia, R.; Burczyk, J.; Cavers, S.; Degen, B.; Finkeldey, R.; Fluch, S.; Gömöry, D.; Gugerli, F.; Koelewijn, H.P.; Koskela, J.; Lefèvre, F.; Morgante, M.; Mueller-Starck, G.; Plomion, C.; Taylor, G.; Turok, J.; Savolainen, O.; Ziegenhagen, B., 2011: Forest ecosystem genomics and adaptation: EVOLTREE conference report. Tree Genetics and Genomes, 7, 4: 869-875. doi: 10.1007/s11295-011-0378-2

Kamm, U.; Gugerli, F.; Rotach, P.; Edwards, P.; Holderegger, R., 2011: Genetic consequences of low local tree densities - implications for the management of naturally rare, insect pollinated species in temperate forests. Forest Ecology and Management, 262, 6: 1047-1053. doi: 10.1016/j.foreco.2011.05.040

Thiel-Egenter, C.; Alvarez, N.; Holderegger, R.; Tribsch, A.; Englisch, T.; Wohlgemuth, T.; Colli, L.; Gaudeul, M.; Gielly, L.; Jogan, N.; Linder, H.P.; Negrini, R.; Niklfeld, H.; Pellecchia, M.; Rioux, D.; Schönswetter, P.; Taberlet, P.; Van Loo, M.; Winkler, M.; ... Gugerli, F., 2011: Break zones in the distributions of alleles and species in alpine plants. Journal of Biogeography, 38, 4: 772-782. doi: 10.1111/j.1365-2699.2010.02441.x

Hepenstrick, D.; Gugerli, F.; Holderegger, R.; Senn, J.; Gremminger, T.; Thiel, D., 2010: Fragmentierung in einem Wildtierkorridor von nationaler Bedeutung. Fragmentation dans un couloir faunistique d'importance nationale. Nature et Paysage. Natur und Landschaft: Inside, 21-23.

Herrmann, D.; Poncet, B.N.; Manel, S.; Rioux, D.; Gielly, L.; Taberlet, P.; Gugerli, F., 2010: Selection criteria for scoring amplified fragment length polymorphisms (AFLPs) positively affect the reliability of population genetic parameter estimates. Genome, 53, 4: 302-310. doi: 10.1139/g10-006

Wirth, L.R.; Graf, R.; Gugerli, F.; Landergott, U.; Holderegger, R., 2010: Between-year variation in seed weights across altitudes in the high-alpine plant Eritrichium nanum. Plant Ecology, 207, 2: 227-231. doi: 10.1007/s11258-009-9667-3

Holderegger, R.; Buehler, D.; Gugerli, F.; Manel, S., 2010: Landscape genetics of plants. Trends in Plant Science, 15, 12: 675-683. doi: 10.1016/j.tplants.2010.09.002

Tribsch, A.; Englisch, T.; Gugerli, F.; Holderegger, R.; Niklfeld, H.; Steinmann, K.; Thiel-Egenter, C.; Zimmermann, Niklaus.E.; Taberlet, P.; IntraBioDiv Consortium, 2010: Integrating data across biodiversity levels. the project IntraBioDiv. In: Spehn, E.M.; Körner, C. (eds), 2010: Data mining for global trends in mountain biodiversity. Boca Raton, CRC Press. 89-105. doi: 10.1201/9781420083705

Wirth, L.; Graf, R.; Gugerli, F.; Landergott, U.; Holderegger, R., 2010: Lower selfing rate at higher altitudes in the alpine plant Eritrichium nanum (Boraginaceae). American Journal of Botany, 97, 5: 899-901. doi: 10.3732/ajb.0900297

Poncet, B.N.; Herrmann, D.; Gugerli, F.; Taberlet, P.; Holderegger, R.; Gielly, L.; Rioux, D.; Thuiller, W.; Aubert, S.; Manel, S., 2010: Tracking genes of ecological relevance using a genome scan in two independent regional population samples of Arabis alpina. Molecular Ecology, 19, 14: 2896-2907. doi: 10.1111/j.1365-294X.2010.04696.x

Kamm, U.; Gugerli, F.; Rotach, P.; Edwards, P.; Holderegger, R., 2010: Open areas in a landscape enhance pollen-mediated gene flow of a tree species: evidence from northern Switzerland. Landscape Ecology, 25, 6: 903-911. doi: 10.1007/s10980-010-9468-z

Jacob, G.; Debrunner, R.; Gugerli, F.; Schmid, B.; Bollmann, K., 2010: Field surveys of capercaillie (Tetrao urogallus) in the Swiss Alps underestimated local abundance of the species as revealed by genetic analyses of non-invasive samples. Conservation Genetics, 11, 1: 33-44. doi: 10.1007/s10592-008-9794-8

Gillet, F.; Peter, M.; Ayer, F.; Bütler, R.; Egli, S., 2010: Long-term dynamics of aboveground fungal communities in a subalpine Norway spruce forest under elevated nitrogen input. Oecologia, 164, 2: 499-510. doi: 10.1007/s00442-010-1668-3

Manel, S.; Poncet, B.N.; Legendre, P.; Gugerli, F.; Holderegger, R., 2010: Common factors drive adaptive genetic variation at different spatial sclaes in Arabis alpina. Molecular Ecology, 19, 17: 3824-3835. doi: 10.1111/j.1365-294X.2010.04716.x

Gugerli, F.; Sperisen, C., 2010: Genetische Struktur von Waldbäumen im Alpenraum als Folge (post)glazialer Populationsgeschichte. Schweizerische Zeitschrift für Forstwesen, 161, 6: 207-215. doi: 10.3188/szf.2010.0207

Keller, D.; Brodbeck, S.; Flöss, I.; Vonwil, G.; Holderegger, R., 2010: Ecological and genetic measurements of dispersal in a threatened dragonfly. Biological Conservation, 143, 11: 2658-2663. doi: 10.1016/j.biocon.2010.07.008

Csencsics, D.; Brodbeck, S.; Holderegger, R., 2010: Cost-effective, species-specific microsatellite development for the endangered dwarf bulrush (Typha minima) using next-generation sequencing technology. Journal of Heredity, 101, 6: 789-793. doi: 10.1093/jhered/esq069

Egli, S.; Ayer, F.; Peter, M.; Eilmann, B.; Rigling, A., 2010: Is forest mushroom productivity driven by tree growth? Results from a thinning experiment. Annals of Forest Science, 67, 5: 509 (9 pp.). doi: 10.1051/forest/2010011

Brodbeck, S.; Gugerli, F., 2010: Sombre sentinelle des chemins - un roi dans les Alpes. Alpen, 32-37.

Brodbeck, S.; Gugerli, F., 2010: Eine faszinierende Wegbegleiterin: Die Arve - Königin der Alpen. Alpen, 32-37.

Hilfiker, K.; Gugerli, F.; Holderegger, R., 2009: Ist das Geschlechterverhältnis der Eibe von praktischer Bedeutung?. Eibenfreund, 74-77.

Thiel-Egenter, C.; Holderegger, R.; Brodbeck, S.; IntraBioDiv Consortium; Gugerli, F., 2009: Concordant genetic breaks, identified by combining clustering and tessellation methods, in two co-distributed alpine plant species. Molecular Ecology, 18, 21: 4495-4507. doi: 10.1111/j.1365-294X.2009.04360.x

Höhn, M.; Gugerli, F.; Abran, P.; Bisztray, G.; Buonamici, A.; Cseke, K.; Hufnagel, L.; Quintela-Sabarís, C.; Sebastiani, F.; Vendramin, G.G., 2009: Variation in the chloroplast DNA of Swiss stone pine (Pinus cembra L.) reflects contrasting post-glacial history of populations from the Carpathians and the Alps. Journal of Biogeography, 36, 9: 1798-1806. doi: 10.1111/j.1365-2699.2009.02122.x

Kamm, U.; Rotach, P.; Gugerli, F.; Siroky, M.; Edwards, P.; Holderegger, R., 2009: Frequent long-distance gene flow in a rare temperate forest tree (Sorbus domestica) at the landscape scale. Heredity, 103, 6: 476-482. doi: 10.1038/hdy.2009.70

Keller, D.; Brodbeck, S.; Holderegger, R., 2009: Characterization of microsatellite loci in Leucorrhinia caudalis, a rare dragonfly endangered throughout Europe. Conservation Genetics Resources, 1, 1: 179-181. doi: 10.1007/s12686-009-9044-5

Alvarez, N.; Thiel-Egenter, C.; Tribsch, A.; Holderegger, R.; Manel, S.; Schönswetter, P.; Taberlet, P.; Brodbeck, S.; Gaudeul, M.; Gielly, L.; Küpfer, P.; Mansion, G.; Negrini, R.; Paun, O.; Pellecchia, M.; Rioux, D.; Schüpfer, F.; Van Loo, M.; Winkler, M.; ... IntraBioDiv Consortium, 2009: History or ecology? Substrate types as a major driver of spatial genetic structure in Alpine plants. Ecology Letters, 12, 7: 632-640. doi: 10.1111/j.1461-0248.2009.01312.x

Balkenhol, N.; Gugerli, F.; Cushman, S.A.; Waits, L.P.; Coulon, A.; Arntzen, J.W.; Holderegger, R.; Wagner, H.H., 2009: Identifying future research needs in landscape genetics: where to from here?. Landscape Ecology, 24: 455-463. doi: 10.1007/s10980-009-9334-z

Wirth, L.R.; Graf, R.; Brodbeck, S.; Reber-Funk, C.; Holderegger, R.; Landergott, U., 2009: Fully informative microsatellite markers for the tetraploid plant Eritrichium nanum (Boraginaceae). Molecular Ecology Resources, 9, 1: 312-314. doi: 10.1111/j.1755-0998.2008.02449.x

Thiel-Egenter, C.; Gugerli, F.; Alvarez, N.; Brodbeck, S.; Cieslak, E.; Colli, L.; Englisch, T.; Gaudeul, M.; Gielly, L.; Korbecka, G.; Negrini, R.; Paun, O.; Pellecchia, M.; Rioux, D.; Ronikier, M.; Schönswetter, P.; Schüpfer, F.; Taberlet, P.; Tribsch, A.; ... IntraBioDiv Consortium, 2009: Effects of species traits on the genetic diversity of high-mountain plants: a multi-species study across the Alps and the Carpathians. Global Ecology and Biogeography, 18, 1: 78-87. doi: 10.1111/j.1466-8238.2008.00421.x

Salzer, K.; Sebastiani, F.; Gugerli, F.; Buonamici, A.; Vendramin, G.G., 2009: Isolation and characterization of polymorphic nuclear microsatellite loci in Pinus cembra L. Molecular Ecology Resources, 9, 3: 858-861. doi: 10.1111/j.1755-0998.2008.02396.x

Gugerli, F., 2009: Können genetische Grundlagen zur nachhaltigen Waldnutzung beitragen?. In: Kräuchi, N.; Kirchner, J. (eds), 2009: Langzeitforschung für eine nachhaltige Waldnutzung. Forum für Wissen 2009, ETH Zürich, September 7, 2009. 103-109.

Kampmann, D.; Herzog, F.; Jeanneret, Ph.; Konold, W.; Peter, M.; Walter, T.; Wildi, O.; Lüscher, A., 2008: Mountain grassland biodiversity: impact of site conditions versus management type. Journal for Nature Conservation, 16, 1: 12-25. doi: 10.1016/j.jnc.2007.04.002

Martin, F.; Aerts, A.; Ahrén, D.; Brun, A.; Danchin, E.G.J.; Duchaussoy, F.; Gibon, J.; Kohler, A.; Lindquist, E.; Pereda, V.; Peter, M.; Grigoriev, I.V., 2008: The genome of Laccaria bicolor provides insights into mycorrhizal symbiosis. Nature, 452, 7183: 88-92. doi: 10.1038/nature06556

Tollefsrud, M.M.; Kissling, R.; Gugerli, F.; Johnsen, Ø.; Skrøppa, T.; Cheddadi, R.; Van der Knaap, W.O.; Latałowa, M.; Terhürne-Berson, R.; Litt, T.; Geburek, T.; Brochmann, C.; Sperisen, C., 2008: Genetic consequences of glacial survival and postglacial colonization in Norway spruce: combined analysis of mitochondrial DNA and fossil pollen. Molecular Ecology, 17, 18: 4134-4150. doi: 10.1111/j.1365-294X.2008.03893.x

Gugerli, F.; Brodbeck, S.; Holderegger, R., 2008: Utility of multilocus genotypes for taxon assignment in stands of closely related European white oaks from Switzerland. Annals of Botany, 102, 5: 855-863. doi: 10.1093/aob/mcn164

Gugerli, F.; Gall, R.; Meier, F.; Wermelinger, B., 2008: Pronounced fluctuations of spruce bark beetle (Scolytinae: Ips typographus) populations do not invoke genetic differentiation. Forest Ecology and Management, 256, 3: 405-409. doi: 10.1016/j.foreco.2008.04.038

Peter, M.; Ayer, F.; Cudlín, P.; Egli, S., 2008: Belowground ectomycorrhizal communities in three Norway spruce stands with different degrees of decline in the Czech Republic. Mycorrhiza, 18, 3: 157-169. doi: 10.1007/s00572-008-0166-5

Holderegger, R.; Herrmann, D.; Poncet, B.; Gugerli, F.; Thuiller, W.; Taberlet, P.; Gielly, L.; Rioux, D.; Brodbeck, S.; Aubert, S.; Manel, S., 2008: Land ahead: using genome scans to identify molecular markers of adaptive relevance. Plant Ecology and Diversity, 1, 2: 273-283. doi: 10.1080/17550870802338420

Scotti, I.; Gugerli, F.; Pastorelli, R.; Sebastiani, F.; Vendramin, G.G., 2008: Maternally and paternally inherited molecular markers elucidate population patterns and inferred dispersal processes on a small scale within a subalpine stand of Norway spruce (Picea abies (L.) Karst.). Forest Ecology and Management, 255, 11: 3806-3812. doi: 10.1016/j.foreco.2008.03.023

Gugerli, F.; Englisch, T.; Niklfeld, H.; Tribsch, A.; Mirek, Z.; Ronikier, M.; Zimmermann, N.E.; Holderegger, R.; Taberlet, P.; IntraBioDiv Consortium, 2008: Relationships among levels of biodiversity and the relevance of intraspecific diversity in conservation - a project synopsis. Perspectives in Plant Ecology, Evolution and Systematics, 10, 4: 259-281. doi: 10.1016/j.ppees.2008.07.001

Gugerli, F.; Brodbeck, S.; Holderegger, R., 2008: Insertions-deletions in a microsatellite flanking region may be resolved by variation in stuttering patterns. Plant Molecular Biology Reporter, 26, 3: 255-262. doi: 10.1007/s11105-008-0034-7

Gugerli, F.; Jacob, G.; Bollmann, K., 2008: Molekulare Marker erzählen aus dem Geschichtenbuch: Auerhuhn-Populationsgenetik in den Schweizer Alpen. Ornithologischer Beobachter, 105, 1: 77-84.

Heiniger, U.; Graf, R.; Rigling, D., 2007: Der Kastanienrindenkrebs auf der Alpennordseite. Biologisch kontrollierbar. Wald und Holz, 88, 5: 50-53.

Manel, S.; Berthoud, F.; Bellemain, E.; Gaudeul, M.; Luikart, G.; Swenson, J.E.; Waits, L.P.; Taberlet, P.; IntraBioDiv Consortium; Gugerli, F.; Holderegger, R.; Steinmann, K.; Thiel, C.; Wohlgemuth, T.; Zimmermann, N.; Brodbeck, S.; Schmatz, D.; Salanon, R., 2007: A new individual-based spatial approach for identifying genetic discontinuities in natural populations. Molecular Ecology, 16, 10: 2031-2043. doi: 10.1111/j.1365-294X.2007.03293.x

Ehrich, D.; Gaudeul, M.; Assefa, A.; Koch, M.A.; Mummenhoff, K.; Nemomissa, S.; IntraBioDiv Consortium; Brochmann, C.; Gugerli, F.; Steinmann, K.; Thiel, C.; Wohlgemuth, T.; Zimmermann, N.; Brodbeck, S.; Schmatz, D.; Salanon, R., 2007: Genetic consequences of Pleistocene range shifts: contrast between the Arctic, the Alps and the East African mountains. Molecular Ecology, 16, 12: 2542-2559. doi: 10.1111/j.1365-294X.2007.03299.x

Hoebee, S.E.; Arnold, U.; Düggelin, C.; Gugerli, F.; Brodbeck, S.; Rotach, P.; Holderegger, R., 2007: Mating patterns and contemporary gene flow by pollen in a large continuous and a small isolated population of the scattered forest tree Sorbus torminalis. Heredity, 99, 1: 47-55. doi: 10.1038/sj.hdy.6800962

Werth, S.; Gugerli, F.; Holderegger, R.; Wagner, H.H.; Csencsics, D.; Scheidegger, C., 2007: Landscape-level gene flow in Lobaria pulmonaria, an epiphytic lichen. Molecular Ecology, 16, 13: 2807-2815. doi: 10.1111/j.1365-294X.2007.03344.x

Gugerli, F.; Walser, J.-C.; Dounavi, K.; Holderegger, R.; Finkeldey, R., 2007: Coincidence of small-scale spatial discontinuities in leaf morphology and nuclear microsatellite variation of Quercus petraea and Q. robur in a mixed forest. Annals of Botany, 99, 4: 713-722. doi: 10.1093/aob/mcm006

Holderegger, R.; Gugerli, F.; Scheidegger, C.; Taberlet, P., 2007: Integrating population genetics with landscape ecology to infer spatio-temporal processes. In: Kienast, F.; Wildi, O.; Ghosh, S. (eds), 2007: A Changing World. Challenges for Landscape Research. Dordrecht, Springer. 145-156. doi: 10.1007/978-1-4020-4436-6_10

Duelli, P.; Baur, P.; Buchecker, M.; Gugerli, F.; Holderegger, R.; Wohlgemuth, T., 2007: The role of value systems in biodiversity research. In: Kienast, F.; Wildi, O.; Ghosh, S. (eds), 2007: A Changing World. Challenges for Landscape Research. Dordrecht, Springer. 27-34. doi: 10.1007/978-1-4020-4436-6_3

Egli, S.; Peter, M.; Buser, C.; Stahel, W.; Ayer, F., 2006: Paddenstoelen plukken vermindert de productie von vruchtlichamen niet. Resultaten van een lange-termijn oderzoek in Zwitserland. Coolia, 49, 3: 146-155.

Peter, M., 2006: Ectomycorrhizal fungi - fairy rings and the wood-wide web. New Phytologist, 171, 4: 685-687. doi: 10.1111/j.1469-8137.2006.01856.x

Egli, S.; Peter, M.; Buser, C.; Stahel, W.; Ayer, F., 2006: Mushroom picking does not impair future harvests - results of a long term study in Switzerland. Biological Conservation, 129, 2: 271-276. doi: 10.1016/j.biocon.2005.10.042

Holderegger, R.; Gugerli, F., 2006: Moderne Forschung ist auf Sammlungen angewiesen. Hotspot, 13.

Werth, S.; Wagner, H.H.; Gugerli, F.; Holderegger, R.; Csencsics, D.; Kalwij, J.M.; Scheidegger, C., 2006: Quantifying dispersal and establishment limitation in a population of an epiphytic lichen. Ecology, 87, 8: 2037-2046. doi: 10.1890/0012-9658(2006)87[2037:QDAELI]2.0.CO;2

Holderegger, R.; Kamm, U.; Gugerli, F., 2006: Adaptive vs. neutral genetic diversity: implications for landscape genetics. Landscape Ecology, 21, 6: 797-807. doi: 10.1007/s10980-005-5245-9

Rigling, A.; Dobbertin, M.; Bürgi, M.; Gimmi, U.; Graf Pannatier, E.; Gugerli, F.; Heiniger, U.; Polomski, J.; Rebetez, M.; Rigling, D.; Weber, P.; Wermelinger, B.; Wohlgemuth, T., 2006: Verdrängen Flaumeichen die Walliser Waldföhren?. Merkblatt für die Praxis, 41. Birmensdorf, Eidg. Forschungsanstalt WSL. 16 p.

Rigling, A.; Dobbertin, M.; Bürgi, M.; Gimmi, U.; Graf Pannatier, E.; Gugerli, F.; Heiniger, U.; Polomski, J.; Rebetez, M.; Rigling, D.; Weber, P.; Wermelinger, B.; Wohlgemuth, T., 2006: Les chênes pubescents chassent-ils les pins sylvestres valaisans?. Notice pour le praticien, 41. Birmensdorf, Institut fédéral de recherches WSL. 16 p.

Holderegger, R.; Angelone, S.; Brodbeck, S.; Csencsics, D.; Gugerli, F.; Hoebee, S.E.; Finkeldey, R., 2005: Application of genetic markers to the discrimination of pure European Black Poplar (Populus nigra) from American Black Poplar (P. deltoides) and Hybrid Poplars (P. x canadensis) in Switzerland. Trees: Structure and Function, 19, 6: 742-747. doi: 10.1007/s00468-005-0006-6

Wirth, L.R.; Hoebee, S.E.; Arnold, U.; Düggelin, C.; Brodbeck, S.; Rotach, P.; Gugerli, F.; Holderegger, R., 2005: Ausbreitung der Elsbeerpollen. Destination unbekannt?. Corminaria, 3-5.

Wagner, H.H.; Holderegger, R.; Werth, S.; Gugerli, F.; Hoebee, S.E.; Scheidegger, C., 2005: Variogram analysis of the spatial genetic structure of continuous populations using multilocus microsatellite data. Genetics, 169, 3: 1739-1752. doi: 10.1534/genetics.104.036038

Holderegger, R.; Walser, J.; Gugerli, F.; Hoebee, S.E.; Scheidegger, C., 2005: Microsatellites reveal regional population differentiation and isolation in Lobaria pulmonaria, an epiphytic lichen. Molecular Ecology, 14, 2: 457-467. doi: 10.1111/j.1365-294x.2004.02423.x

Gugerli, F.; Parducci, L.; Petit, R.J., 2005: Ancient plant DNA: review and prospects. New Phytologist, 166, 2: 409-418. doi: 10.1111/j.1469-8137.2005.01360.x

Wirth, L.R.; Angelone, S.; Hoebee, S.E.; Arnold, U.; Düggelin, C.; Hilfiker, K.; Brodbeck, S.; Gugerli, F.; Holderegger, R., 2005: Die Elsbeere (Sorbus torminalis). Fruchtbarkeit trotz Einsamkeit. Wald und Holz, 86, 2: 33-35.

Hilfiker, K.; Ulber, M.; Gugerli, F.; Rotach, P.; Bonfils, P.; Holderegger, R., 2004: Comment promouvoir et régénérer l'if en Suisse?. La Forêt, 57, 1: 11-13.

Hilfiker, K.; Holderegger, R.; Rotach, P.; Gugerli, F., 2004: Dynamics of genetic variation in Taxus baccata: local versus regional perspectives. Canadian Journal of Botany, 82: 219-227. doi: 10.1139/B03-136

Walser, J.-C.; Gugerli, F.; Holderegger, R.; Kuonen, D.; Scheidegger, C., 2004: Recombination and clonal propagation in different populations of the lichen Lobaria pulmonaria. Heredity, 93, 4: 322-329. doi: 10.1038/sj.hdy.6800505

Hilfiker, K.; Gugerli, F.; Schütz, J.; Rotach, P.; Holderegger, R., 2004: Low RAPD variation and female-biased sex ratio indicate genetic drift in small populations of the dioecious conifer Taxus baccata in Switzerland. Conservation Genetics, 5, 3: 357-365. doi: 10.1023/B:COGE.0000031144.95293.1b

Cudlin, P.; Godbold, D.L.; Bonifacio, E.; Egli, S.; Fritz, H.W.; Gonthier, P.; Chmelikova, E.; Kowalik, P.; Martinotti, M.G.; Moravec, I.; Nicolotti, G.; Varese, C.; Peter, M.; Zanini, E., 2003: Conditions of natural regeneration of Norway spruce ecosystems in the Krkonose Mts. Ekologia Bratislava, 22, Suppl. 1/2003: 66-79.

Hilfiker, K.; Ulber, M.; Gugerli, F.; Rotach, P.; Bonfils, P.; Holderegger, R., 2003: In kleinen Eibenpopulationen: Mehr Weibchen als Männchen. Wald und Holz, 84, 2: 44-46.

Holderegger, R.; Arnold, U.; Bonfils, P.; Dounavi, A.; Finkeldey, R.; Gugerli, F.; Hilfiker, K.; Hoebee, S.; Rotach, P.; Studhalter, S.; Ulber, M., 2002: WSL-Forschungsprojekte zu seltenen Baumarten in der Abteilung Genetische Ökologie, insbesondere der Elsbeere. Corminaria, 11.

Gugerli, F.; Sperisen, C.; Mátyás, G.; Senn, J.; Anzidei, M.; Vendramin, G.G., 2002: Molecular markers help to reveal post-glacial re-colonisation routes of forest tree species in the alpine region. In: Bottarin, R.; Tappeiner, U. (eds), 2002: Interdisciplinary Mountain Research. Berlin; Wien, Blackwell. 156-161.

Brunner, I.; Brodbeck, S.; Walthert, L., 2002: Fine root chemistry, starch concentration, and 'vitality' of subalpine conifer forests in relation to soil pH. Forest Ecology and Management, 165, 1-3: 75-84. doi: 10.1016/S0378-1127(01)00633-8

Egli, S.; Peter, M.; Falcato, S., 2002: Dynamics of ectomycorrhizal fungi after windthrow. Forest Snow and Landscape Research, 77, 1-2: 81-88.

Gugerli, F., 2001: Reaktion von Tundrapflanzen auf Klimaerwärmung - Resultate aus einem circumpolar-alpinen Grossversuch. In: Haudenschild, R. (eds), 2001: Die Polarforschung als Schlüssel zum Verständnis der globalen Veränderungen. Bern, Schweizerische Kommission für Polarforschung SKP. 31-38.

Peter, M.; Ayer, F.; Egli, S.; Honegger, R., 2001: Above- and below-ground community structure of ectomycorrhizal fungi in three Norway spruce (Picea abies) stands in Switzerland. Canadian Journal of Botany, 79, 10: 1134-1151. doi: 10.1139/b01-092

Gugerli, F.; Bauert, M.R., 2001: Growth and reproduction of Polygonum viviparum show weak responses to experimentally increased temperature at a Swiss Alpine site. Botanica Helvetica, 111, 2: 169-180. doi: 10.5169/seals-73907

Brunner, I.; Brodbeck, S., 2001: Response of mycorrhizal Norway spruce seedlings to various nitrogen loads and sources. Environmental Pollution, 114, 2: 223-233. doi: 10.1016/S0269-7491(00)00219-0

Gugerli, F.; Holderegger, R., 2001: Nunatak survival, tabula rasa and the influence of the Pleistocene ice-ages on plant evolution in mountain areas. Trends in Plant Science, 6, 9: 397-398. doi: 10.1016/S1360-1385(01)02053-2

Egli, S.; Ayer, F.; Peter, M.; Schneider, B., 2001: Arcangeliella borziana Cavara. + Picea abies (L.) Karst.. In: Agerer, R.; Danielson, R.M.; Egli, S.; Ingleby, K.; Luoma, D.; Treu, R. (eds), 2001: Schwäbisch Gmünd, Einhorn-Verlag. 9-14.

Brunner, I.; Brodbeck, S.; Büchler, U.; Sperisen, C., 2001: Molecular identification of fine roots of trees from the Alps: reliable and fast DNA extraction and PCR-RFLP analyses of plastid DNA. Molecular Ecology, 10, 8: 2079-2087. doi: 10.1046/j.1365-294X.2001.01325.x

Gugerli, F.; Sperisen, C.; Büchler, U.; Brunner, I.; Brodbeck, S.; Palmer, J.D.; Qiu, Y., 2001: The evolutionary split of pinaceae from other conifers: evidence from an intron loss and a multigene phylogeny. Molecular Phylogenetics and Evolution, 21, 2: 167-175. doi: 10.1006/mpev.2001.1004

Gugerli, F.; Senn, J.; Anzidei, M.; Madaghiele, A.; Büchler, U.; Sperisen, C.; Vendramin, G.G., 2001: Chloroplast microsatellites and mitochondrial nad1 intron 2 sequences indicate congruent phylogenetic relationships among Swiss stone pine (Pinus cembra), Siberian stone pine (P. sibirica), and Siberian dwarf pine (P. pumila). Molecular Ecology, 10, 6: 1489-1497. doi: 10.1046/j.1365-294X.2001.01285.x

Peter, M.; Büchler, U.; Ayer, F.; Egli, S., 2001: Ectomycorrhizas and molecular phylogeny of the hypogeous, russuloid fungus Arcangeliella borziana. Mycological Research, 105, 10: 1231-1238. doi: 10.1016/S0953-7562(08)61994-2

Gugerli, F.; Sperisen, C.; Büchler, U.; Magni, F.; Geburek, T.; Jeandroz, S.; Senn, J., 2001: Haplotype variation in a mitochondrial tandem repeat of Norway spruce (Picea abies) populations suggests a serious founder effect during postglacial re-colonization of the western Alps. Molecular Ecology, 10, 5: 1255-1263. doi: 10.1046/j.1365-294X.2001.01279.x

Peter, M.; Ayer, F.; Egli, S., 2001: Nitrogen addition in a Norway spruce stand altered macromycete sporocarp production and below-ground ectomycorrhizal species composition. New Phytologist, 149, 2: 311-325. doi: 10.1046/j.1469-8137.2001.00030.x

Sperisen, C.; Büchler, U.; Gugerli, F.; Mátyás, G.; Geburek, T.; Vendramin, G.G., 2001: Tandem repeats in plant mitochondrial genomes: application to the analysis of population differentiation in the conifer Norway spruce. Molecular Ecology, 10, 1: 257-263. doi: 10.1046/j.1365-294X.2001.01180.x

Brunner, I.; Brodbeck, S.; Genenger, M., 2000: Effects of various nitrogen lLoads on the nitrate reductase activity in roots and mycorrhizas of Norway spruce seedlings. Phyton. Annales Rei Botanicae, 40, 4: 43-48.

Eichenberger, K.; Gugerli, F.; Schneller, J.J., 2000: Morphological and molecular diversity of Swiss common bean cultivars (Phaseolus vulgaris L., Fabaceae). Botanica Helvetica, 110, 1: 61-77. doi: 10.5169/seals-73587

Sperisen, C.; Gugerli, F.; Büchler, U.; Mátyás, G., 2000: Comparison of two rapid DNA extraction protocols for gymnosperms for application in popupation genetic and phylogenetic studies. Forest Genetics, 7, 2: 133-136.

Von Flüe, I.; Gugerli, F.; Holderegger, R.; Schneller, J.J., 1999: Genetic and morphological variability in alpine Saxifraga oppositifolia L. after colonization. Feddes Repertorium, 110, 7-8: 555-559. doi: 10.1002/fedr.19991100716

Gugerli, F.; Eichenberger, K.; Schneller, J.J., 1999: Promiscuity in populations of the cushion plant Saxifraga oppositifolia in the Swiss Alps as inferred from random amplified polymorphic DNA (RAPD). Molecular Ecology, 8, 3: 453-461. doi: 10.1046/j.1365-294X.1999.00586.x

Schneller, J.; Holderegger, R.; Gugerli, F.; Eichenberger, K.; Lutz, E., 1998: Patterns of genetic variation detected by RAPDs suggest a single origin with subsequent mutations and long‐distance dispersal in the apomictic fern Dryopteris remota (Dryopteridaceae) . American Journal of Botany, 85, 7: 1038-1042. doi: 10.2307/2446372

Gugerli, F., 1998: Effect of elevation on sexual reproduction in alpine populations of Saxifraga oppositifolia (Saxifragaceae). Oecologia, 114, 1: 60-66. doi: 10.1007/s004420050420

Peter, M.; Egli, S., 1997: Aufnahme und Akkumulation von Blei im Pilz-Pflanzensystem. In: 1997: Interaktionen Boden - Pflanze, Solothurn, March 13-14, 1997. 65-68.